ENSG00000154227


Homo sapiens

Features
Gene ID: ENSG00000154227
  
Biological name :CERS3
  
Synonyms : ceramide synthase 3 / CERS3 / Q8IU89
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q26.3
Gene start: 100400395
Gene end: 100544995
  
Corresponding Affymetrix probe sets: 1554252_a_at (Human Genome U133 Plus 2.0 Array)   1554253_a_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000377672
Ensembl peptide - ENSP00000453598
Ensembl peptide - ENSP00000453816
Ensembl peptide - ENSP00000284382
Ensembl peptide - ENSP00000437640
NCBI entrez gene - 204219     See in Manteia.
OMIM - 615276
RefSeq - XM_017022004
RefSeq - NM_001290343
RefSeq - NM_178842
RefSeq - XM_011521355
RefSeq - XM_011521357
RefSeq - XM_011521358
RefSeq - XM_017022002
RefSeq - XM_017022003
RefSeq - NM_001290341
RefSeq - NM_001290342
RefSeq Peptide - NP_849164
RefSeq Peptide - NP_001277270
RefSeq Peptide - NP_001277271
RefSeq Peptide - NP_001277272
swissprot - Q8IU89
swissprot - H0YN05
swissprot - H0YMG6
Ensembl - ENSG00000154227
  
Related genetic diseases (OMIM): 615023 - Ichthyosis, congenital, autosomal recessive 9, 615023
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cers3aENSDARG00000078541Danio rerio
 cers3bENSDARG00000036337Danio rerio
 CERS3ENSGALG00000014624Gallus gallus
 Cers3ENSMUSG00000030510Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CERS2 / Q96G23 / ceramide synthase 2ENSG0000014341851
CERS4 / Q9HA82 / ceramide synthase 4ENSG0000009066144
CERS5 / Q8N5B7 / ceramide synthase 5ENSG0000013962441
CERS6 / Q6ZMG9 / ceramide synthase 6ENSG0000017229239


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR006634  TRAM/LAG1/CLN8 homology domain
 IPR009057  Homeobox-like domain superfamily
 IPR016439  Sphingosine N-acyltransferase Lag1/Lac1-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0030148 sphingolipid biosynthetic process TAS
 biological_processGO:0030216 keratinocyte differentiation IMP
 biological_processGO:0046513 ceramide biosynthetic process IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0050291 sphingosine N-acyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000491 Keratitis "Inflammation of the cornea." [HPO:curators]
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 HP:0000656 Ectropion "An abnormal turning outward of the lower eyelid." [HPO:sdoelken]
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
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 HP:0001019 Erythroderma "An inflammatory exfoliative dermatosis involving nearly all of the surface of the skin. Erythroderma develops suddenly. A patchy erythema may generalize and spread to affect most of the skin. Scaling may appear in 2-6 days and be accompanied by hot, red, dry skin, malaise, and fever." [HPO:probinson]
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 HP:0001508 Failure to thrive 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0007431 Congenital ichthyosiform erythroderma 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0025092 Epidermal acanthosis "Diffuse hypertrophy or thickening of the stratum spinosum of the epidermis (prickle cell layer of the skin)." []
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 HP:0025114 Hypergranulosis "Hypergranulosis is an increased thickness of the stratum granulosum." []
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 HP:0200020 Corneal erosions "Erosions or Abbrasions of the cornea s outermost layer of epithelial cells." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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