ENSDARG00000037064


Danio rerio

Features
Gene ID: ENSDARG00000037064
  
Biological name :galca
  
Synonyms : galactosylceramidase a / galca / Q5SNX7
  
Possible biological names infered from orthology : Galactocerebrosidase / galactosylceramidase / GALC / P54803 / P54818
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 4769762
Gene end: 4793450
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000053869
NCBI entrez gene - 449649     See in Manteia.
RefSeq - NM_001005921
RefSeq Peptide - NP_001005921
swissprot - Q5SNX7
ZFIN ID - ZDB-GENE-040724-243
Ensembl - ENSDARG00000037064
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GALCENSGALG00000010593Gallus gallus
 GALCENSG00000054983Homo sapiens
 GalcENSMUSG00000021003Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
galcb / galactosylceramidase b / GALC* / P54803* / P54818* / galactosylceramidase* / Galactocerebrosidase *ENSDARG0000001647467


Protein motifs (from Interpro)
Interpro ID Name
 IPR001286  Glycoside hydrolase, family 59
 IPR017853  Glycoside hydrolase superfamily
 IPR035394  Glycosyl hydrolase family 59, central domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006665 sphingolipid metabolic process IEA
 biological_processGO:0006683 galactosylceramide catabolic process ISS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0016042 lipid catabolic process IEA
 cellular_componentGO:0005764 lysosome IDA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004336 galactosylceramidase activity ISS
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001114 head head apoptotic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr