ENSDARG00000037154


Danio rerio

Features
Gene ID: ENSDARG00000037154
  
Biological name :hivep3b
  
Synonyms : hivep3b / human immunodeficiency virus type I enhancer binding protein 3b
  
Possible biological names infered from orthology : A2A884 / HIVEP3 / human immunodeficiency virus type I enhancer binding protein 3 / Q5T1R4 / Transcription factor HIVEP3
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 34321394
Gene end: 34401412
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000054019
Ensembl peptide - ENSDARP00000119216
NCBI entrez gene - 568037     See in Manteia.
swissprot - F1QA26
swissprot - F1R7G9
ZFIN ID - ZDB-GENE-100922-42
Ensembl - ENSDARG00000037154
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HIVEP3ENSGALG00000027365Gallus gallus
 HIVEP3ENSG00000127124Homo sapiens
 A2A884ENSMUSG00000028634Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hivep3a / human immunodeficiency virus type I enhancer binding protein 3a / Q5T1R4* / HIVEP3* / A2A884* / Transcription factor HIVEP3 * / human immunodeficiency virus type I enhancer bindin...ENSDARG0000007592831
hivep2a / human immunodeficiency virus type I enhancer binding protein 2a / HIVEP2* / P31629* / Q3UHF7* / human immunodeficiency virus type I enhancer binding protein 2* / Mus musculus huma...ENSDARG0000003998728
hivep1 / human immunodeficiency virus type I enhancer binding protein 1 / P15822*ENSDARG0000010365825
hivep2b / human immunodeficiency virus type I enhancer binding protein 2b / HIVEP2* / P31629* / human immunodeficiency virus type I enhancer binding protein 2*ENSDARG0000001877325
znf831 / zinc finger protein 831 / Q5JPB2* / Zfp831*ENSDARG000000749068


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr