ENSDARG00000037781


Danio rerio

Features
Gene ID: ENSDARG00000037781
  
Biological name :acss2
  
Synonyms : acss2 / acyl-CoA synthetase short chain family member 2
  
Possible biological names infered from orthology : Acetyl-coenzyme A synthetase, cytoplasmic / Q9NR19 / Q9QXG4
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 9230431
Gene end: 9291892
  
Corresponding Affymetrix probe sets: Dr.526.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000146673
Ensembl peptide - ENSDARP00000156331
Ensembl peptide - ENSDARP00000055053
Ensembl peptide - ENSDARP00000112054
Ensembl peptide - ENSDARP00000114048
Ensembl peptide - ENSDARP00000120712
NCBI entrez gene - 436914     See in Manteia.
swissprot - E9QJ17
swissprot - F1QAA7
swissprot - F1QXR8
swissprot - Q6DHN4
ZFIN ID - ZDB-GENE-040718-388
Ensembl - ENSDARG00000037781
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACSS2ENSGALG00000003362Gallus gallus
 ACSS2ENSG00000131069Homo sapiens
 Acss2ENSMUSG00000027605Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acss2l / acyl-CoA synthetase short chain family member 2 likeENSDARG0000006902978
acss1 / acyl-CoA synthetase short chain family member 1 / Q99NB1* / Q9NUB1* / Acetyl-coenzyme A synthetase 2-like, mitochondrial *ENSDARG0000004414254
acss3 / acyl-CoA synthetase short chain family member 3 / Q14DH7* / Q9H6R3* / Acyl-CoA synthetase short-chain family member 3, mitochondrial *ENSDARG0000003221833
acsm3 / acyl-CoA synthetase medium chain family member 3 / Q3UNX5* / Q53FZ2* / Acyl-coenzyme A synthetase ACSM3, mitochondrial *ENSDARG0000000488029


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR011904  Acetate-CoA ligase
 IPR020845  AMP-binding, conserved site
 IPR025110  AMP-binding enzyme, C-terminal domain
 IPR032387  Acetyl-coenzyme A synthetase, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0019427 acetyl-CoA biosynthetic process from acetate IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0003987 acetate-CoA ligase activity IEA
 molecular_functionGO:0016208 AMP binding IEA


Pathways (from Reactome)
Pathway description
Transcriptional activation of mitochondrial biogenesis
Ethanol oxidation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr