ENSDARG00000038716


Danio rerio

Features
Gene ID: ENSDARG00000038716
  
Biological name :casq1a
  
Synonyms : calsequestrin 1a / casq1a
  
Possible biological names infered from orthology : calsequestrin 1 / CASQ1 / O09165 / P31415
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 38039857
Gene end: 38054482
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134433
NCBI entrez gene - 445226     See in Manteia.
RefSeq - NM_001003620
RefSeq Peptide - NP_001003620
swissprot - A0A0R4IKE0
ZFIN ID - ZDB-GENE-040801-139
Ensembl - ENSDARG00000038716
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CASQ1ENSG00000143318Homo sapiens
 Casq1ENSMUSG00000007122Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
casq1b / calsequestrin 1b / CASQ1* / O09165* / P31415* / calsequestrin 1*ENSDARG0000001810557
casq2 / calsequestrin 2 / O09161* / O14958* / Mus musculus calsequestrin 2 (Casq2), transcript variant 1, mRNA.*ENSDARG0000000898244


Protein motifs (from Interpro)
Interpro ID Name
 IPR001393  Calsequestrin
 IPR012336  Thioredoxin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0030018 Z disc IDA
 molecular_functionGO:0005509 calcium ion binding IDA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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