ENSG00000143318


Homo sapiens

Features
Gene ID: ENSG00000143318
  
Biological name :CASQ1
  
Synonyms : calsequestrin 1 / CASQ1 / P31415
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q23.2
Gene start: 160190556
Gene end: 160201886
  
Corresponding Affymetrix probe sets: 219645_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000357057
Ensembl peptide - ENSP00000418051
NCBI entrez gene - 844     See in Manteia.
OMIM - 114250
RefSeq - NM_001231
RefSeq Peptide - NP_001222
swissprot - C9JAC8
swissprot - P31415
Ensembl - ENSG00000143318
  
Related genetic diseases (OMIM): 616231 - Myopathy, vacuolar, with CASQ1 aggregates, 616231
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 casq1aENSDARG00000038716Danio rerio
 casq1bENSDARG00000018105Danio rerio
 Casq1ENSMUSG00000007122Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CASQ2 / O14958 / calsequestrin 2ENSG0000011872964


Protein motifs (from Interpro)
Interpro ID Name
 IPR001393  Calsequestrin
 IPR018233  Calsequestrin, conserved site
 IPR036249  Thioredoxin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007029 endoplasmic reticulum organization IEA
 biological_processGO:0007519 skeletal muscle tissue development IEA
 biological_processGO:0009408 response to heat IEA
 biological_processGO:0010033 response to organic substance IEA
 biological_processGO:0010880 regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum IEA
 biological_processGO:0014809 regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion IEA
 biological_processGO:0014870 response to muscle inactivity IEA
 biological_processGO:0014894 response to denervation involved in regulation of muscle adaptation IEA
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0045214 sarcomere organization IEA
 biological_processGO:0051258 protein polymerization IDA
 biological_processGO:0051281 positive regulation of release of sequestered calcium ion into cytosol IMP
 biological_processGO:0051282 regulation of sequestering of calcium ion IEA
 biological_processGO:1901341 positive regulation of store-operated calcium channel activity IMP
 biological_processGO:1903779 regulation of cardiac conduction TAS
 biological_processGO:2001256 regulation of store-operated calcium entry IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0005783 endoplasmic reticulum NAS
 cellular_componentGO:0005790 smooth endoplasmic reticulum TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0014802 terminal cisterna IEA
 cellular_componentGO:0014804 terminal cisterna lumen IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum ISS
 cellular_componentGO:0030016 myofibril IEA
 cellular_componentGO:0030315 T-tubule IEA
 cellular_componentGO:0031674 I band IEA
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane TAS
 cellular_componentGO:0033018 sarcoplasmic reticulum lumen ISS
 cellular_componentGO:0042383 sarcolemma IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0003198 Myopathy 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003388 Easy fatigability 
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 HP:0003394 Muscle cramps 
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 HP:0003458 EMG myopathic abnormalities "The presence of abnormal electromyographic patterns indicative of myopathy, such as small-short polyphasic motor unit potentials." [HPO:curators]
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 HP:0003554 Type 2 muscle fiber atrophy "Atrophy (wasting) affecting primary type 2 muscle fibers. This feature in general can only be observed on muscle biopsy." [HPO:curators]
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003687 Centralized nuclei 
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0030200 Fatiguable weakness of proximal limb muscles "A type of weakness of a skeletal muscle of proximal part of a limb that occurs after a muscle group is used and lessens if the muscle group has some rest. That is, there is diminution of strength with repetitive muscle actions." [UK:rheller]
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 HP:0100301 Muscle fiber tubular inclusions "Unusual regions of densely packed membranous tubules known as tubular aggregates which present as membranous inclusions, derived from membranes of sarcoplasmic reticulum and mitochondria, containing miscellaneous proteins with a variety of enzymatic activities." [HPO:sdoelken, PMID:15113116]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000143318 CASQ1 / P31415 / calsequestrin 1  / -






 

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