ENSG00000118729


Homo sapiens

Features
Gene ID: ENSG00000118729
  
Biological name :CASQ2
  
Synonyms : calsequestrin 2 / CASQ2 / O14958
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p13.1
Gene start: 115700007
Gene end: 115768781
  
Corresponding Affymetrix probe sets: 207317_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000261448
NCBI entrez gene - 845     See in Manteia.
OMIM - 114251
RefSeq - NM_001232
RefSeq Peptide - NP_001223
swissprot - O14958
Ensembl - ENSG00000118729
  
Related genetic diseases (OMIM): 611938 - Ventricular tachycardia, catecholaminergic polymorphic, 2, 611938
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 casq2ENSDARG00000008982Danio rerio
 CASQ2ENSGALG00000015018Gallus gallus
 Casq2ENSMUSG00000027861Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CASQ1 / P31415 / calsequestrin 1ENSG0000014331863


Protein motifs (from Interpro)
Interpro ID Name
 IPR001393  Calsequestrin
 IPR018233  Calsequestrin, conserved site
 IPR036249  Thioredoxin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002027 regulation of heart rate IEA
 biological_processGO:0005513 detection of calcium ion TAS
 biological_processGO:0006941 striated muscle contraction TAS
 biological_processGO:0010649 regulation of cell communication by electrical coupling IMP
 biological_processGO:0010880 regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum IEA
 biological_processGO:0010881 regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion IEA
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0043267 negative regulation of potassium ion transport ISS
 biological_processGO:0045214 sarcomere organization IEA
 biological_processGO:0051208 sequestering of calcium ion IMP
 biological_processGO:0051258 protein polymerization IDA
 biological_processGO:0060048 cardiac muscle contraction IMP
 biological_processGO:0060306 regulation of membrane repolarization ISS
 biological_processGO:0060315 negative regulation of ryanodine-sensitive calcium-release channel activity ISS
 biological_processGO:0071313 cellular response to caffeine IMP
 biological_processGO:0086029 Purkinje myocyte to ventricular cardiac muscle cell signaling NAS
 biological_processGO:1901017 negative regulation of potassium ion transmembrane transporter activity ISS
 biological_processGO:1903779 regulation of cardiac conduction TAS
 cellular_componentGO:0005622 intracellular IMP
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005891 voltage-gated calcium channel complex ISS
 cellular_componentGO:0014701 junctional sarcoplasmic reticulum membrane TAS
 cellular_componentGO:0016529 sarcoplasmic reticulum ISS
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0030314 junctional membrane complex IEA
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane TAS
 cellular_componentGO:0033018 sarcoplasmic reticulum lumen IC
 cellular_componentGO:0034704 calcium channel complex TAS
 molecular_functionGO:0005509 calcium ion binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IDA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001279 Syncope "Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. This term refers to an abnormally increased disposition to syncope." [HPO:curators]
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 HP:0001645 Sudden cardiac death 
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 HP:0001699 Sudden death 
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 HP:0002321 Vertigo "An abnormal sensation of spinning while the body is actually stationary." [HPO:curators]
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 HP:0004756 Ventricular tachycardia 
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 HP:0005110 Atrial fibrillation 
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 HP:0025478 Atrial standstill "Atrial standstill or silent atrium is a rare condition presenting with the absence of electrical and mechanical activity in the atria. It presents with the absence of P waves, bradycardia, and wide QRS complex in the electrocardiogram." [PMID:23074623]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000118729 CASQ2 / O14958 / calsequestrin 2  / -






 

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