ENSDARG00000008982


Danio rerio

Features
Gene ID: ENSDARG00000008982
  
Biological name :casq2
  
Synonyms : calsequestrin 2 / casq2
  
Possible biological names infered from orthology : Mus musculus calsequestrin 2 (Casq2), transcript variant 1, mRNA. / O09161 / O14958
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 33097289
Gene end: 33107237
  
Corresponding Affymetrix probe sets: Dr.11592.1.S1_at (Zebrafish Array)   NM_001002682_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000020399
NCBI entrez gene - 114410     See in Manteia.
RefSeq - NM_001002682
RefSeq Peptide - NP_001002682
swissprot - Q6DI16
ZFIN ID - ZDB-GENE-010724-12
Ensembl - ENSDARG00000008982
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CASQ2ENSGALG00000015018Gallus gallus
 CASQ2ENSG00000118729Homo sapiens
 Casq2ENSMUSG00000027861Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
casq1a / calsequestrin 1a / CASQ1* / P31415* / calsequestrin 1*ENSDARG0000003871660
casq1b / calsequestrin 1b / CASQ1* / O09165* / P31415* / calsequestrin 1*ENSDARG0000001810558


Protein motifs (from Interpro)
Interpro ID Name
 IPR001393  Calsequestrin
 IPR012336  Thioredoxin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000008982 casq2 / calsequestrin 2 / O09161* / O14958* / Mus musculus calsequestrin 2 (Casq2), transcript variant 1, mRNA.*  / -






 

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