ENSDARG00000038858


Danio rerio

Features
Gene ID: ENSDARG00000038858
  
Biological name :setd7
  
Synonyms : setd7 / SET domain containing (lysine methyltransferase) 7
  
Possible biological names infered from orthology : Histone-lysine N-methyltransferase SETD7 / Q8VHL1 / Q8WTS6
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 46199941
Gene end: 46213571
  
Corresponding Affymetrix probe sets: Dr.12876.1.A1_at (Zebrafish Array)   NM_001002456_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000056733
NCBI entrez gene - 436729     See in Manteia.
RefSeq - NM_001002456
RefSeq Peptide - NP_001002456
swissprot - F1QXL2
ZFIN ID - ZDB-GENE-040718-156
Ensembl - ENSDARG00000038858
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SETD7ENSGALG00000009800Gallus gallus
 SETD7ENSG00000145391Homo sapiens
 Setd7ENSMUSG00000037111Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR003409  MORN motif
 IPR017155  Histone-lysine N-methyltransferase, SET


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0034968 histone lysine methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0018024 histone-lysine N-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart morphology , abnormal
heart hypoplastic , abnormal
heart linear , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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