ENSDARG00000038866


Danio rerio

Features
Gene ID: ENSDARG00000038866
  
Biological name :trappc8
  
Synonyms : trafficking protein particle complex 8 / trappc8
  
Possible biological names infered from orthology : Q9Y2L5
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 6308564
Gene end: 6476705
  
Corresponding Affymetrix probe sets: Dr.15605.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071563
NCBI entrez gene - 570167     See in Manteia.
swissprot - E7FA12
ZFIN ID - ZDB-GENE-130530-601
Ensembl - ENSDARG00000038866
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000015157Gallus gallus
 Q9Y2L5ENSG00000153339Homo sapiens
 Trappc8ENSMUSG00000033382Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR024420  TRAPP III complex, Trs85


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0030242 autophagy of peroxisome IBA
 biological_processGO:0034497 protein localization to phagophore assembly site IBA
 biological_processGO:0044804 autophagy of nucleus IBA
 cellular_componentGO:0000407 phagophore assembly site IBA
 cellular_componentGO:0031410 cytoplasmic vesicle IBA
 cellular_componentGO:1990072 TRAPPIII protein complex IBA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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