ENSMUSG00000033382


Mus musculus

Features
Gene ID: ENSMUSG00000033382
  
Biological name :Trappc8
  
Synonyms : trafficking protein particle complex 8 / Trappc8
  
Possible biological names infered from orthology : Q9Y2L5
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: A2
Gene start: 20817223
Gene end: 20896093
  
Corresponding Affymetrix probe sets: 10457745 (MoGene1.0st)   10457776 (MoGene1.0st)   1428969_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000095262
Ensembl peptide - ENSMUSP00000153183
Ensembl peptide - ENSMUSP00000152931
Ensembl peptide - ENSMUSP00000025177
NCBI entrez gene - 75964     See in Manteia.
MGI - MGI:2443008
RefSeq - XM_017318013
RefSeq - XM_011247030
RefSeq - XM_011247031
RefSeq - XM_011247032
RefSeq - XM_011247033
RefSeq - XM_017318011
RefSeq - XM_017318012
RefSeq - NM_029491
RefSeq - NM_177038
RefSeq - XM_006526333
RefSeq - XM_011247028
RefSeq - XM_011247029
RefSeq Peptide - NP_796012
RefSeq Peptide - NP_083767
swissprot - E9PY51
swissprot - E9PWG2
swissprot - A0A286YCX6
swissprot - A0A286YCE0
Ensembl - ENSMUSG00000033382
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc8ENSDARG00000038866Danio rerio
 ENSGALG00000015157Gallus gallus
 Q9Y2L5ENSG00000153339Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR024420  TRAPP III complex, Trs85


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0007030 Golgi organization ISO
 biological_processGO:0030242 autophagy of peroxisome IBA
 biological_processGO:0034497 protein localization to phagophore assembly site IBA
 biological_processGO:0044804 autophagy of nucleus IBA
 cellular_componentGO:0000407 phagophore assembly site IBA
 cellular_componentGO:0030008 TRAPP complex ISO
 cellular_componentGO:0031410 cytoplasmic vesicle IBA
 cellular_componentGO:1990072 TRAPPIII protein complex IBA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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