ENSG00000153339


Homo sapiens

Features
Gene ID: ENSG00000153339
  
Biological name :TRAPPC8
  
Synonyms : Q9Y2L5 / trafficking protein particle complex 8 / TRAPPC8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: -1
Band: q12.1
Gene start: 31829173
Gene end: 31953136
  
Corresponding Affymetrix probe sets: 207305_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000464591
Ensembl peptide - ENSP00000463876
Ensembl peptide - ENSP00000463973
Ensembl peptide - ENSP00000283351
Ensembl peptide - ENSP00000462550
Ensembl peptide - ENSP00000463764
NCBI entrez gene - 22878     See in Manteia.
OMIM - 614136
RefSeq - XM_017025617
RefSeq - XM_005258233
RefSeq - XM_005258234
RefSeq - XM_005258235
RefSeq - XM_006722420
RefSeq - XM_011525884
RefSeq - XM_017025615
RefSeq - XM_017025616
RefSeq - NM_014939
RefSeq Peptide - NP_055754
swissprot - J3QQS5
swissprot - J3QR00
swissprot - J3QQJ5
swissprot - J3KSL8
swissprot - Q9Y2L5
swissprot - J3QSA1
Ensembl - ENSG00000153339
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc8ENSDARG00000038866Danio rerio
 ENSGALG00000015157Gallus gallus
 Trappc8ENSMUSG00000033382Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR024420  TRAPP III complex, Trs85


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0007030 Golgi organization IMP
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0030242 autophagy of peroxisome IBA
 biological_processGO:0034497 protein localization to phagophore assembly site IBA
 biological_processGO:0044804 autophagy of nucleus IBA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0000407 phagophore assembly site IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0030008 TRAPP complex IDA
 cellular_componentGO:0031410 cytoplasmic vesicle IBA
 cellular_componentGO:1990072 TRAPPIII protein complex IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity TAS


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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