ENSDARG00000039430


Danio rerio

Features
Gene ID: ENSDARG00000039430
  
Biological name :msl2b
  
Synonyms : male-specific lethal 2 homolog b (Drosophila) / msl2b
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase MSL2 / MSL2 / MSL complex subunit 2 / Q69ZF8 / Q9HCI7
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 26941197
Gene end: 26945390
  
Corresponding Affymetrix probe sets: Dr.10646.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000110262
NCBI entrez gene - 797201     See in Manteia.
RefSeq - NM_001163313
RefSeq Peptide - NP_001156785
swissprot - F1QVJ4
ZFIN ID - ZDB-GENE-030131-1621
Ensembl - ENSDARG00000039430
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MSL2ENSGALG00000039294Gallus gallus
 MSL2ENSG00000174579Homo sapiens
 Msl2ENSMUSG00000066415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
msl2a / male-specific lethal 2 homolog a (Drosophila) / MSL2* / Q9HCI7* / Q69ZF8* / MSL complex subunit 2* / E3 ubiquitin-protein ligase MSL2 *ENSDARG0000003890945


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR032043  E3 ubiquitin-protein ligase Msl2, zinc RING finger
 IPR032049  E3 ubiquitin-protein ligase Msl2, CXC domain
 IPR033467  Tesmin/TSO1-like CXC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043984 histone H4-K16 acetylation IBA
 cellular_componentGO:0072487 MSL complex IBA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000027187 kat8 / K(lysine) acetyltransferase 8 / Q9D1P2* / Q9H7Z6* / lysine acetyltransferase 8* / Histone acetyltransferase KAT8 *  / complex
 ENSDARG00000090223 msl1b / male-specific lethal 1 homolog b (Drosophila) / MSL1* / Q68DK7* / Q6PDM1* / male specific lethal 1 homolog*  / complex






 

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