ENSDARG00000039502


Danio rerio

Features
Gene ID: ENSDARG00000039502
  
Biological name :eef1a1a
  
Synonyms : eef1a1a / eukaryotic translation elongation factor 1 alpha 1a
  
Possible biological names infered from orthology : EEF1A1 / Elongation factor 1-alpha 1 / eukaryotic translation elongation factor 1 alpha 1 / P10126 / P68104
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 27314795
Gene end: 27325885
  
Corresponding Affymetrix probe sets: Dr.9415.1.A1_at (Zebrafish Array)   NM_200009_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000002751
Ensembl peptide - ENSDARP00000133540
Ensembl peptide - ENSDARP00000104468
NCBI entrez gene - 336334     See in Manteia.
RefSeq - NM_200009
RefSeq Peptide - NP_956303
swissprot - E9QGR4
swissprot - A0A0R4IJ37
swissprot - Q6P969
ZFIN ID - ZDB-GENE-030131-8278
Ensembl - ENSDARG00000039502
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EEF1A1ENSGALG00000015917Gallus gallus
 EEF1A1ENSG00000156508Homo sapiens
 Eef1a1ENSMUSG00000037742Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eef1a1b / eukaryotic translation elongation factor 1 alpha 1b / EEF1A1* / P10126* / P68104* / Elongation factor 1-alpha 1 * / eukaryotic translation elongation factor 1 alpha 1*ENSDARG0000006995197
Q92005 / eef1a1l1 / eukaryotic translation elongation factor 1 alpha 1, like 1ENSDARG0000002085091
eef1a2 / eukaryotic translation elongation factor 1 alpha 2 / P62631* / Q05639* / Elongation factor 1-alpha 2 *ENSDARG0000000683891
si:dkey-37o8.1ENSDARG0000007172770
CABZ01101996.1ENSDARG0000010999611


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR004160  Translation elongation factor EFTu/EF1A, C-terminal
 IPR004161  Translation elongation factor EFTu-like, domain 2
 IPR004539  Translation elongation factor EF1A, eukaryotic/archaeal
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009001  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031157  Tr-type G domain, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006414 translational elongation IEA
 biological_processGO:0007507 heart development IMP
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003746 translation elongation factor activity IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Eukaryotic Translation Elongation
HSF1 activation
Neutrophil degranulation
Protein methylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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