ENSDARG00000039697


Danio rerio

Features
Gene ID: ENSDARG00000039697
  
Biological name :shtn1
  
Synonyms : Q6P0R8 / shootin 1 / shtn1
  
Possible biological names infered from orthology : A0MZ66 / Q8K2Q9
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 21311401
Gene end: 21368775
  
Corresponding Affymetrix probe sets: Dr.9046.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000058026
NCBI entrez gene - 407656     See in Manteia.
RefSeq - NM_001198761
RefSeq Peptide - NP_001185690
swissprot - Q6P0R8
ZFIN ID - ZDB-GENE-121127-1
Ensembl - ENSDARG00000039697
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SHTN1ENSGALG00000030276Gallus gallus
 SHTN1ENSG00000187164Homo sapiens
 Shtn1ENSMUSG00000041362Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-280e21.3ENSDARG0000005651933
si:ch211-1o7.3ENSDARG0000001750425


Protein motifs (from Interpro)
Interpro ID Name
 IPR024849  Shootin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006930 substrate-dependent cell migration, cell extension ISS
 biological_processGO:0007265 Ras protein signal transduction ISS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007409 axonogenesis ISS
 biological_processGO:0032488 Cdc42 protein signal transduction ISS
 biological_processGO:0038007 netrin-activated signaling pathway ISS
 biological_processGO:0045773 positive regulation of axon extension ISS
 biological_processGO:0048812 neuron projection morphogenesis ISS
 biological_processGO:0060327 cytoplasmic actin-based contraction involved in cell motility ISS
 biological_processGO:0061163 endoplasmic reticulum polarization ISS
 biological_processGO:0061573 actin filament bundle retrograde transport ISS
 biological_processGO:2000114 regulation of establishment of cell polarity ISS
 biological_processGO:2001224 positive regulation of neuron migration ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005875 microtubule associated complex ISS
 cellular_componentGO:0015630 microtubule cytoskeleton ISS
 cellular_componentGO:0030027 lamellipodium ISS
 cellular_componentGO:0030175 filopodium ISS
 cellular_componentGO:0030424 axon ISS
 cellular_componentGO:0030426 growth cone ISS
 cellular_componentGO:0031252 cell leading edge ISS
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043204 perikaryon ISS
 cellular_componentGO:0044295 axonal growth cone ISS
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISS
 molecular_functionGO:0051015 actin filament binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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