ENSMUSG00000041362


Mus musculus

Features
Gene ID: ENSMUSG00000041362
  
Biological name :Shtn1
  
Synonyms : Q8K2Q9 / Shootin-1 / Shtn1
  
Possible biological names infered from orthology : A0MZ66
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: D3
Gene start: 58973358
Gene end: 59076069
  
Corresponding Affymetrix probe sets: 10468762 (MoGene1.0st)   1429055_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041378
Ensembl peptide - ENSMUSP00000126227
NCBI entrez gene - 71653     See in Manteia.
MGI - MGI:1918903
RefSeq - NM_001114312
RefSeq - NM_175172
RefSeq Peptide - NP_001107784
RefSeq Peptide - NP_780381
swissprot - Q8K2Q9
Ensembl - ENSMUSG00000041362
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 shtn1ENSDARG00000039697Danio rerio
 SHTN1ENSGALG00000030276Gallus gallus
 SHTN1ENSG00000187164Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024849  Shootin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006930 substrate-dependent cell migration, cell extension ISS
 biological_processGO:0007265 Ras protein signal transduction ISS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007409 axonogenesis ISO
 biological_processGO:0032488 Cdc42 protein signal transduction ISS
 biological_processGO:0038007 netrin-activated signaling pathway ISS
 biological_processGO:0045773 positive regulation of axon extension ISS
 biological_processGO:0048812 neuron projection morphogenesis IMP
 biological_processGO:0051899 membrane depolarization ISO
 biological_processGO:0060327 cytoplasmic actin-based contraction involved in cell motility ISS
 biological_processGO:0061163 endoplasmic reticulum polarization IMP
 biological_processGO:0061573 actin filament bundle retrograde transport ISS
 biological_processGO:2000114 regulation of establishment of cell polarity IMP
 biological_processGO:2001222 regulation of neuron migration IGI
 biological_processGO:2001224 positive regulation of neuron migration ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule ISO
 cellular_componentGO:0005875 microtubule associated complex IDA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 cellular_componentGO:0030027 lamellipodium ISS
 cellular_componentGO:0030175 filopodium ISS
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030426 growth cone ISO
 cellular_componentGO:0031252 cell leading edge IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043204 perikaryon IEA
 cellular_componentGO:0044295 axonal growth cone IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019894 kinesin binding IPI
 molecular_functionGO:0045296 cadherin binding ISO
 molecular_functionGO:0051015 actin filament binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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