ENSDARG00000039770


Danio rerio

Features
Gene ID: ENSDARG00000039770
  
Biological name :dync2li1
  
Synonyms : dync2li1 / dynein, cytoplasmic 2, light intermediate chain 1
  
Possible biological names infered from orthology : Cytoplasmic dynein 2 light intermediate chain 1 / Q8K0T2 / Q8TCX1
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 10970614
Gene end: 10981704
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000058146
NCBI entrez gene - 393452     See in Manteia.
RefSeq - NM_200480
RefSeq Peptide - NP_956774
swissprot - F1R764
ZFIN ID - ZDB-GENE-040426-1230
Ensembl - ENSDARG00000039770
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DYNC2LI1ENSGALG00000009954Gallus gallus
 Q8TCX1ENSG00000138036Homo sapiens
 Q8K0T2ENSMUSG00000024253Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022780  Dynein family light intermediate chain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain swollen , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000150 pronephric duct pronephric duct motile cilium decreased length , abnormal
pronephric duct motile cilium decreased amount , abnormal
Show

 ZFA:0000151 pronephros pronephros cystic , abnormal
Show

 ZFA:0000554 olfactory epithelium olfactory epithelium axoneme swollen , abnormal
olfactory epithelium non-motile cilium decreased length , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
Show

 ZFA:0009127 photoreceptor cell photoreceptor cell photoreceptor outer segment decreased length , abnormal
photoreceptor cell intraciliary transport particle mislocalised , abnormal
photoreceptor cell photoreceptor connecting cilium swollen , abnormal
photoreceptor cell photoreceptor outer segment membrane disorganized , abnormal
photoreceptor cell photoreceptor outer segment membrane vacuolated , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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