ENSDARG00000039914


Danio rerio

Features
Gene ID: ENSDARG00000039914
  
Biological name :gapdhs
  
Synonyms : gapdhs / glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
  
Possible biological names infered from orthology : O14556
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 45044642
Gene end: 45069882
  
Corresponding Affymetrix probe sets: AFFX-Dr-GAPDH-3_at (Zebrafish Array)   AFFX-Dr-GAPDH-5_at (Zebrafish Array)   AFFX-Dr-GAPDH-M_at (Zebrafish Array)   Dr.1194.1.S1_at (Zebrafish Array)   NM_213094_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000058383
Ensembl peptide - ENSDARP00000144134
NCBI entrez gene - 406367     See in Manteia.
RefSeq - NM_213094
RefSeq Peptide - NP_998259
swissprot - F1R3D3
ZFIN ID - ZDB-GENE-020913-1
Ensembl - ENSDARG00000039914
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GAPDHSENSG00000105679Homo sapiens
 GapdhsENSMUSG00000061099Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gapdh / Q5XJ10 / glyceraldehyde-3-phosphate dehydrogenase / Gm3839* / P04406* / P16858* / Gm10358* / Gm11214* / Gm12117* / Gm15294*ENSDARG0000004345775


Protein motifs (from Interpro)
Interpro ID Name
 IPR006424  Glyceraldehyde-3-phosphate dehydrogenase, type I
 IPR016040  NAD(P)-binding domain
 IPR020828  Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
 IPR020829  Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
 IPR020830  Glyceraldehyde 3-phosphate dehydrogenase, active site
 IPR020831  Glyceraldehyde/Erythrose phosphate dehydrogenase family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006006 glucose metabolic process IEA
 biological_processGO:0006096 glycolytic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0050661 NADP binding IEA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
Glycolysis
Gluconeogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000039914 gapdhs / glyceraldehyde-3-phosphate dehydrogenase, spermatogenic / O14556*  / complex






 

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