ENSDARG00000040048


Danio rerio

Features
Gene ID: ENSDARG00000040048
  
Biological name :GALNTL6
  
Synonyms : GALNTL6 / si:ch211-15e22.3
  
Possible biological names infered from orthology : polypeptide N-acetylgalactosaminyltransferase like 6 / Q49A17
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 37752171
Gene end: 38132612
  
Corresponding Affymetrix probe sets: Dr.12540.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000150300
Ensembl peptide - ENSDARP00000154423
Ensembl peptide - ENSDARP00000119502
NCBI entrez gene - 568915     See in Manteia.
RefSeq - XM_005159991
RefSeq Peptide - NP_001139074
swissprot - B8A6C4
ZFIN ID - ZDB-GENE-090312-115
Ensembl - ENSDARG00000040048
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000032355Gallus gallus
 GALNTL6ENSGALG00000030588Gallus gallus
 Q49A17ENSG00000174473Homo sapiens
 Galntl6ENSMUSG00000096914Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
galnt7 / UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 / Q80VA0* / Q86SF2* / N-acetylgalactosaminyltransferase 7 * / polypeptide N-acetylgalactosaminyl...ENSDARG0000005730336
galnt17 / polypeptide N-acetylgalactosaminyltransferase 17 / Q6IS24* / Q7TT15*ENSDARG0000004241832
galnt9 / polypeptide N-acetylgalactosaminyltransferase 9 / Q9HCQ5*ENSDARG0000000683228
galnt8a.2 / polypeptide N-acetylgalactosaminyltransferase 8a, tandem duplicate 2 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000001186927
galnt8a.1 / polypeptide N-acetylgalactosaminyltransferase 8a, tandem duplicate 1 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000011594027
galnt18b / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18b / Q6P9A2* / Q8K1B9* / GALNT18* / polypeptide N-acetylgalactosaminyltransferase 18*ENSDARG0000005943827
galnt8a.1 / polypeptide N-acetylgalactosaminyltransferase 8a, tandem duplicate 1 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000001235527
galnt8b.1 / polypeptide N-acetylgalactosaminyltransferase 8b, tandem duplicate 1 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000004585126
galnt8b.2 / polypeptide N-acetylgalactosaminyltransferase 8b, tandem duplicate 2 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000009532426
galnt18a / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18a / Q6P9A2* / Q8K1B9* / GALNT18* / polypeptide N-acetylgalactosaminyltransferase 18*ENSDARG0000010088925
galnt10 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) / Q6P9S7* / Q86SR1* / polypeptide N-acetylgalactosaminyltransferase 10*ENSDARG0000010382517
CABZ01075242.1ENSDARG0000011422713


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr