ENSDARG00000059438


Danio rerio

Features
Gene ID: ENSDARG00000059438
  
Biological name :galnt18b
  
Synonyms : galnt18b / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18b
  
Possible biological names infered from orthology : GALNT18 / polypeptide N-acetylgalactosaminyltransferase 18 / Q6P9A2 / Q8K1B9
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 66259046
Gene end: 66452827
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000077039
Ensembl peptide - ENSDARP00000140873
NCBI entrez gene - 100310831     See in Manteia.
RefSeq - XM_003199013
swissprot - E7F4H6
swissprot - A0A0R4IWU9
ZFIN ID - ZDB-GENE-091014-1
Ensembl - ENSDARG00000059438
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GALNT18ENSGALG00000005584Gallus gallus
 Q6P9A2ENSG00000110328Homo sapiens
 Q8K1B9ENSMUSG00000038296Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
galnt18a / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18a / Q6P9A2* / Q8K1B9* / GALNT18* / polypeptide N-acetylgalactosaminyltransferase 18*ENSDARG0000010088979
galnt9 / polypeptide N-acetylgalactosaminyltransferase 9 / Q9HCQ5*ENSDARG0000000683250
galnt17 / polypeptide N-acetylgalactosaminyltransferase 17 / Q6IS24* / Q7TT15*ENSDARG0000004241848
galnt8b.1 / polypeptide N-acetylgalactosaminyltransferase 8b, tandem duplicate 1 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000004585144
galnt8a.1 / polypeptide N-acetylgalactosaminyltransferase 8a, tandem duplicate 1 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000011594043
galnt8a.2 / polypeptide N-acetylgalactosaminyltransferase 8a, tandem duplicate 2 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000001186943
galnt8b.2 / polypeptide N-acetylgalactosaminyltransferase 8b, tandem duplicate 2 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000009532443
galnt8a.1 / polypeptide N-acetylgalactosaminyltransferase 8a, tandem duplicate 1 / P17658* / GALNT8* / Q9NY28* / polypeptide N-acetylgalactosaminyltransferase 8*ENSDARG0000001235541
GALNTL6 / si:ch211-15e22.3 / Q49A17* / polypeptide N-acetylgalactosaminyltransferase like 6*ENSDARG0000004004827
galnt7 / UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 / Q80VA0* / Q86SF2* / N-acetylgalactosaminyltransferase 7 * / polypeptide N-acetylgalactosaminyl...ENSDARG0000005730325
CABZ01075242.1ENSDARG0000011422711
galnt10 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) / Q6P9S7* / Q86SR1* / polypeptide N-acetylgalactosaminyltransferase 10*ENSDARG000001038258


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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