ENSG00000174473


Homo sapiens

Features
Gene ID: ENSG00000174473
  
Biological name :GALNTL6
  
Synonyms : GALNTL6 / polypeptide N-acetylgalactosaminyltransferase like 6 / Q49A17
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q34.1
Gene start: 171812254
Gene end: 173041559
  
Corresponding Affymetrix probe sets: 1555273_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000423827
Ensembl peptide - ENSP00000483822
Ensembl peptide - ENSP00000425590
Ensembl peptide - ENSP00000423313
NCBI entrez gene - 442117     See in Manteia.
OMIM - 615138
RefSeq - XM_017008244
RefSeq - XM_011531994
RefSeq - XM_011531995
RefSeq - XM_011531996
RefSeq - XM_011531997
RefSeq - XM_017008243
RefSeq - NM_001034845
RefSeq - XM_011531993
RefSeq Peptide - NP_001030017
swissprot - E5D8G0
swissprot - D6RCP4
swissprot - A0A087X115
swissprot - Q49A17
Ensembl - ENSG00000174473
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GALNTL6ENSDARG00000040048Danio rerio
 GALNTL6ENSGALG00000030588Gallus gallus
 Galntl6ENSMUSG00000096914Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86SR1 / GALNT10 / polypeptide N-acetylgalactosaminyltransferase 10ENSG0000016457472
GALNT7 / Q86SF2 / polypeptide N-acetylgalactosaminyltransferase 7ENSG0000010958638
Q8N3T1 / GALNT15 / polypeptide N-acetylgalactosaminyltransferase 15ENSG0000013138632
Q6IS24 / GALNT17 / polypeptide N-acetylgalactosaminyltransferase 17ENSG0000018527431
GALNT9 / Q9HCQ5 / polypeptide N-acetylgalactosaminyltransferase 9ENSG0000018287028
Q6P9A2 / GALNT18 / polypeptide N-acetylgalactosaminyltransferase 18ENSG0000011032827
GALNT8 / P17658 / Q9NY28 / polypeptide N-acetylgalactosaminyltransferase 8ENSG0000013003527


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases
 IPR035992  Ricin B-like lectins


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0018243 protein O-linked glycosylation via threonine IDA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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