ENSG00000182870


Homo sapiens

Features
Gene ID: ENSG00000182870
  
Biological name :GALNT9
  
Synonyms : GALNT9 / polypeptide N-acetylgalactosaminyltransferase 9 / Q9HCQ5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q24.33
Gene start: 132196372
Gene end: 132329349
  
Corresponding Affymetrix probe sets: 229451_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000444709
Ensembl peptide - ENSP00000438221
Ensembl peptide - ENSP00000440544
Ensembl peptide - ENSP00000329846
Ensembl peptide - ENSP00000380488
Ensembl peptide - ENSP00000394446
NCBI entrez gene - 50614     See in Manteia.
OMIM - 606251
RefSeq - XM_017019374
RefSeq - NM_001122636
RefSeq - NM_021808
RefSeq - XM_017019371
RefSeq - XM_017019372
RefSeq - XM_017019373
RefSeq Peptide - NP_001116108
RefSeq Peptide - NP_068580
swissprot - F5H557
swissprot - H3BM10
swissprot - J3KNN1
swissprot - Q9HCQ5
swissprot - F5H317
Ensembl - ENSG00000182870
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 galnt9ENSDARG00000006832Danio rerio
 GALNT9ENSGALG00000002242Gallus gallus
 Galnt9ENSMUSG00000033316Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6IS24 / GALNT17 / polypeptide N-acetylgalactosaminyltransferase 17ENSG0000018527461
Q6P9A2 / GALNT18 / polypeptide N-acetylgalactosaminyltransferase 18ENSG0000011032849
GALNT8 / P17658 / Q9NY28 / polypeptide N-acetylgalactosaminyltransferase 8ENSG0000013003544
Q8N3T1 / GALNT15 / polypeptide N-acetylgalactosaminyltransferase 15ENSG0000013138630
Q86SR1 / GALNT10 / polypeptide N-acetylgalactosaminyltransferase 10ENSG0000016457429
GALNT7 / Q86SF2 / polypeptide N-acetylgalactosaminyltransferase 7ENSG0000010958629
Q49A17 / GALNTL6 / polypeptide N-acetylgalactosaminyltransferase like 6ENSG0000017447328


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR001202  WW domain
 IPR029044  Nucleotide-diphospho-sugar transferases
 IPR035992  Ricin B-like lectins


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006493 protein O-linked glycosylation NAS
 biological_processGO:0016266 O-glycan processing TAS
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity TAS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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