ENSG00000164574


Homo sapiens

Features
Gene ID: ENSG00000164574
  
Biological name :GALNT10
  
Synonyms : GALNT10 / polypeptide N-acetylgalactosaminyltransferase 10 / Q86SR1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q33.2
Gene start: 154190730
Gene end: 154420984
  
Corresponding Affymetrix probe sets: 207357_s_at (Human Genome U133 Plus 2.0 Array)   212256_at (Human Genome U133 Plus 2.0 Array)   230906_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000415210
Ensembl peptide - ENSP00000428573
Ensembl peptide - ENSP00000297107
Ensembl peptide - ENSP00000366889
NCBI entrez gene - 55568     See in Manteia.
OMIM - 608043
RefSeq - NM_198321
RefSeq Peptide - NP_938080
swissprot - F2Z2M7
swissprot - Q86SR1
Ensembl - ENSG00000164574
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 galnt10ENSDARG00000103825Danio rerio
 GALNT10ENSGALG00000004033Gallus gallus
 Q6P9S7ENSMUSG00000020520Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q49A17 / GALNTL6 / polypeptide N-acetylgalactosaminyltransferase like 6ENSG0000017447371
GALNT7 / Q86SF2 / polypeptide N-acetylgalactosaminyltransferase 7ENSG0000010958640
Q8N3T1 / GALNT15 / polypeptide N-acetylgalactosaminyltransferase 15ENSG0000013138633
Q6IS24 / GALNT17 / polypeptide N-acetylgalactosaminyltransferase 17ENSG0000018527432
GALNT9 / Q9HCQ5 / polypeptide N-acetylgalactosaminyltransferase 9ENSG0000018287029
Q6P9A2 / GALNT18 / polypeptide N-acetylgalactosaminyltransferase 18ENSG0000011032828
GALNT8 / P17658 / Q9NY28 / polypeptide N-acetylgalactosaminyltransferase 8ENSG0000013003527


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR027791  Galactosyltransferase, C-terminal
 IPR029044  Nucleotide-diphospho-sugar transferases
 IPR035992  Ricin B-like lectins


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006493 protein O-linked glycosylation IDA
 biological_processGO:0016266 O-glycan processing IDA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004653 polypeptide N-acetylgalactosaminyltransferase activity TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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