ENSDARG00000040076


Danio rerio

Features
Gene ID: ENSDARG00000040076
  
Biological name :pycard
  
Synonyms : pycard / PYD and CARD domain containing
  
Possible biological names infered from orthology : PYDC1 / pyrin domain containing 1 / Q8WXC3 / Q9EPB4 / Q9ULZ3
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 41984032
Gene end: 41990421
  
Corresponding Affymetrix probe sets: Dr.8329.1.S1_at (Zebrafish Array)   NM_131495_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000055920
NCBI entrez gene - 57923     See in Manteia.
RefSeq - NM_131495
RefSeq Peptide - NP_571570
swissprot - A8E7Q7
ZFIN ID - ZDB-GENE-000511-2
Ensembl - ENSDARG00000040076
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PYCARDENSG00000103490Homo sapiens
 PYDC1ENSG00000169900Homo sapiens
 PycardENSMUSG00000030793Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001315  CARD domain
 IPR004020  DAPIN domain
 IPR011029  Death-like domain superfamily
 IPR033516  CARD8/ASC/NALP1, CARD domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 biological_processGO:0045087 innate immune response IEA


Pathways (from Reactome)
Pathway description
CLEC7A/inflammasome pathway
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased life span , exacerbated
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr