ENSDARG00000040310


Danio rerio

Features
Gene ID: ENSDARG00000040310
  
Biological name :prpf4bb
  
Synonyms : pre-mRNA processing factor 4Bb / prpf4bb
  
Possible biological names infered from orthology : pre-mRNA processing factor 4B / PRPF4B / Q13523 / Q61136 / Serine/threonine-protein kinase PRP4 homolog
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 11469811
Gene end: 11506064
  
Corresponding Affymetrix probe sets: Dr.22259.1.A1_at (Zebrafish Array)   Dr.4891.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000097088
Ensembl peptide - ENSDARP00000121254
swissprot - F1QWY2
ZFIN ID - ZDB-GENE-040426-2799
Ensembl - ENSDARG00000040310
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043751Gallus gallus
 ENSGALG00000012813Gallus gallus
 PRPF4BENSG00000112739Homo sapiens
 Prpf4bENSMUSG00000021413Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
prpf4ba / pre-mRNA processing factor 4Ba / PRPF4B* / Q13523* / Q61136* / pre-mRNA processing factor 4B* / Serine/threonine-protein kinase PRP4 homolog *ENSDARG0000000878462
clk2a / CDC-like kinase 2a / CLK2* / O35491* / P49760* / CDC like kinase 2* / Dual specificity protein kinase CLK2 *ENSDARG0000006295414
clk2b / CDC-like kinase 2b / CLK2* / P49760* / CDC like kinase 2*ENSDARG0000005987013
clk4a / CDC-like kinase 4a / CLK4* / CLK1* / O35493* / Q9HAZ1* / P49759* / P22518* / CDC like kinase 1* / CDC like kinase 4* / Dual specificity protein kinase CLK4 * / Dual specificity prot...ENSDARG0000008937213
clk4b / CDC-like kinase 4b / CLK4* / CLK1* / O35493* / Q9HAZ1* / P49759* / P22518* / CDC like kinase 1* / CDC like kinase 4* / Dual specificity protein kinase CLK4 * / Dual specificity prot...ENSDARG0000000590813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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