ENSMUSG00000021413


Mus musculus

Features
Gene ID: ENSMUSG00000021413
  
Biological name :Prpf4b
  
Synonyms : Prpf4b / Q61136 / Serine/threonine-protein kinase PRP4 homolog
  
Possible biological names infered from orthology : pre-mRNA processing factor 4B / Q13523
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A3.3
Gene start: 34875302
Gene end: 34906064
  
Corresponding Affymetrix probe sets: 10404538 (MoGene1.0st)   1425497_a_at (Mouse Genome 430 2.0 Array)   1425498_at (Mouse Genome 430 2.0 Array)   1436427_at (Mouse Genome 430 2.0 Array)   1451732_at (Mouse Genome 430 2.0 Array)   1451909_a_at (Mouse Genome 430 2.0 Array)   1455696_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152654
Ensembl peptide - ENSMUSP00000077019
Ensembl peptide - ENSMUSP00000152349
Ensembl peptide - ENSMUSP00000152545
NCBI entrez gene - 19134     See in Manteia.
MGI - MGI:109584
RefSeq - XM_017315441
RefSeq - XM_017315437
RefSeq - XM_017315438
RefSeq - XM_017315439
RefSeq - XM_017315440
RefSeq - NM_013830
RefSeq - XM_006516582
RefSeq - XM_006516583
RefSeq - XM_006516584
RefSeq - XM_017315425
RefSeq - XM_017315426
RefSeq - XM_017315427
RefSeq - XM_017315428
RefSeq - XM_017315429
RefSeq - XM_017315430
RefSeq - XM_017315431
RefSeq - XM_017315432
RefSeq - XM_017315433
RefSeq - XM_017315434
RefSeq - XM_017315435
RefSeq - XM_017315436
RefSeq Peptide - NP_038858
swissprot - A0A1Y7VM68
swissprot - A0A1Y7VLT3
swissprot - Q61136
Ensembl - ENSMUSG00000021413
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prpf4baENSDARG00000008784Danio rerio
 prpf4bbENSDARG00000040310Danio rerio
 ENSGALG00000043751Gallus gallus
 ENSGALG00000012813Gallus gallus
 PRPF4BENSG00000112739Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Clk2 / O35491 / Dual specificity protein kinase CLK2 / P49760* / CDC like kinase 2*ENSMUSG0000006891715
Clk3 / O35492 / Dual specificity protein kinase CLK3 / P49761* / CDC like kinase 3*ENSMUSG0000003231615
Clk4 / O35493 / Dual specificity protein kinase CLK4 / Q9HAZ1* / CDC like kinase 4*ENSMUSG0000002038514
Clk1 / P22518 / Dual specificity protein kinase CLK1 / P49759* / CDC like kinase 1*ENSMUSG0000002603414


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0016310 phosphorylation IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005694 chromosome IDA
 cellular_componentGO:0016607 nuclear speck ISO
 cellular_componentGO:0071013 catalytic step 2 spliceosome ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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