ENSDARG00000040401


Danio rerio

Features
Gene ID: ENSDARG00000040401
  
Biological name :slc25a20
  
Synonyms : slc25a20 / solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
  
Possible biological names infered from orthology : O43772 / Q9Z2Z6 / solute carrier family 25 member 20 / solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 105376
Gene end: 109686
  
Corresponding Affymetrix probe sets: Dr.2784.1.A1_at (Zebrafish Array)   NM_200859_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059139
NCBI entrez gene - 393833     See in Manteia.
RefSeq - NM_200859
RefSeq Peptide - NP_957153
swissprot - Q6P5K6
ZFIN ID - ZDB-GENE-040426-1869
Ensembl - ENSDARG00000040401
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC25A20ENSGALG00000028227Gallus gallus
 O43772ENSG00000178537Homo sapiens
 Q9Z2Z6ENSMUSG00000032602Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-150i13.2ENSDARG0000007105262
FO704822.1 / Q8CFJ7* / Q8N413* / SLC25A45* / solute carrier family 25 member 45*ENSDARG0000010251334
slc25a29 / solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 / Q8N8R3* / Q8BL03* / solute carrier family 25 member 29* / solute carrier family 25 (mitochon...ENSDARG0000005735234
SLC25A29 / solute carrier family 25 member 29 / Q8N8R3*ENSDARG0000009884933
Q1ECW7 / slc25a47a / solute carrier family 25, member 47a / Q6Q0C1* / Q6IS41* / SLC25A47* / solute carrier family 25 member 47*ENSDARG0000005992333
Q6DHS9 / slc25a48 / solute carrier family 25, member 48 / Q6ZT89* / Q8BW66*ENSDARG0000002125030
slc25a47b / solute carrier family 25, member 47b / Q6Q0C1* / SLC25A47* / solute carrier family 25 member 47*ENSDARG0000010207120


Protein motifs (from Interpro)
Interpro ID Name
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006839 mitochondrial transport IBA
 biological_processGO:0015879 carnitine transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1902603 carnitine transmembrane transport IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0005476 carnitine:acyl carnitine antiporter activity IBA
 molecular_functionGO:0015226 carnitine transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Import of palmitoyl-CoA into the mitochondrial matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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