ENSG00000178537


Homo sapiens

Features
Gene ID: ENSG00000178537
  
Biological name :SLC25A20
  
Synonyms : O43772 / SLC25A20 / solute carrier family 25 member 20
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p21.31
Gene start: 48856931
Gene end: 48898993
  
Corresponding Affymetrix probe sets: 203658_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000388563
Ensembl peptide - ENSP00000388986
Ensembl peptide - ENSP00000326305
NCBI entrez gene - 788     See in Manteia.
OMIM - 613698
RefSeq - NM_000387
RefSeq Peptide - NP_000378
swissprot - C9JPE1
swissprot - F8WEF6
swissprot - O43772
Ensembl - ENSG00000178537
  
Related genetic diseases (OMIM): 212138 - Carnitine-acylcarnitine translocase deficiency, 212138
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc25a20ENSDARG00000040401Danio rerio
 SLC25A20ENSGALG00000028227Gallus gallus
 Q9Z2Z6ENSMUSG00000032602Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N8R3 / SLC25A29 / solute carrier family 25 member 29ENSG0000019711935
Q8N413 / SLC25A45 / solute carrier family 25 member 45ENSG0000016224133
Q6Q0C1 / SLC25A47 / solute carrier family 25 member 47ENSG0000014010733
Q6ZT89 / SLC25A48 / solute carrier family 25 member 48ENSG0000014583216


Protein motifs (from Interpro)
Interpro ID Name
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006839 mitochondrial transport IBA
 biological_processGO:0006853 carnitine shuttle TAS
 biological_processGO:0015879 carnitine transport IBA
 biological_processGO:1902603 carnitine transmembrane transport IEA
 biological_processGO:1902616 acyl carnitine transmembrane transport IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005476 carnitine:acyl carnitine antiporter activity IBA
 molecular_functionGO:0015226 carnitine transmembrane transporter activity IBA
 molecular_functionGO:0015227 acyl carnitine transmembrane transporter activity EXP


Pathways (from Reactome)
Pathway description
Import of palmitoyl-CoA into the mitochondrial matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000737 Irritability 
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 HP:0000961 Cyanosis 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001254 Lethargy 
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 HP:0001259 Coma 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001399 Hepatic failure 
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 HP:0001638 Cardiomyopathy 
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 HP:0001662 Bradycardia 
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 HP:0001678 Atrioventricular block 
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 HP:0001714 Ventricular hypertrophy 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0001985 Hypoketotic hypoglycemia 
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 HP:0001987 Hyperammonemia 
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 HP:0002045 Hypothermia 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002615 Hypotension 
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 HP:0002882 Sudden episodic apnea, severe, may cause death "Recurrent bouts of sudden, severe apnea that may be life-threatening." [HPO:curators]
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003162 Fasting hypoglycemia 
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 HP:0003201 Rhabdomyolysis 
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 HP:0003215 Dicarboxylic aciduria 
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 HP:0003234 Decreased plasma carnitine 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0004756 Ventricular tachycardia 
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 HP:0006543 Cardiorespiratory arrest 
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 HP:0006682 Ventricular extrasystoles "Premature ventricular contractions (PVC) or ventricular extrasystoles are premature contractions of the heart that arise in response to an impulse in the ventricles rather than the normal impulse from the sinoatrial (SA) node." [HPO:curators]
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 HP:0008331 Elevated creatine kinase after exercise 
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 HP:0040290 Abnormality of skeletal muscles 
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 HP:0045045 Elevated plasma acylcarnitine levels 
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 HP:0100520 Oliguria "Low output of urine, clinically classified as an output below 300-500ml/day." [HPO:sdoelken]
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 HP:0100602 Preecplampsia "Pregnancy-induced hypertension in association with significant amounts of protein in the urine." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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