ENSDARG00000040485


Danio rerio

Features
Gene ID: ENSDARG00000040485
  
Biological name :gsdmeb
  
Synonyms : gasdermin Eb / gsdmeb
  
Possible biological names infered from orthology : gasdermin E / Gasdermin-E Gasdermin-E, N-terminal Gasdermin-E, C-terminal / GSDME / O60443 / Q9Z2D3
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 21425114
Gene end: 21441226
  
Corresponding Affymetrix probe sets: Dr.21541.1.A1_at (Zebrafish Array)   Dr.21797.1.S1_at (Zebrafish Array)   NM_001001947_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000123662
Ensembl peptide - ENSDARP00000146497
Ensembl peptide - ENSDARP00000059251
NCBI entrez gene - 335722     See in Manteia.
RefSeq - NM_001001947
RefSeq Peptide - NP_001001947
swissprot - E9QBE8
swissprot - Q6J2R6
ZFIN ID - ZDB-GENE-030131-7662
Ensembl - ENSDARG00000040485
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DFNA5ENSGALG00000010997Gallus gallus
 GSDMEENSG00000105928Homo sapiens
 GsdmeENSMUSG00000029821Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gsdmea / gasdermin Ea / GSDME* / O60443* / Q9Z2D3* / gasdermin E* / Gasdermin-E Gasdermin-E, N-terminal Gasdermin-E, C-terminal*ENSDARG0000008676233
pjvk / pejvakin / Q0ZLH2* / Q0ZLH3*ENSDARG0000007994518


Protein motifs (from Interpro)
Interpro ID Name
 IPR007677  Gasdermin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009889 regulation of biosynthetic process IMP
 biological_processGO:0042471 ear morphogenesis IMP
 biological_processGO:0042472 inner ear morphogenesis IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr