ENSDARG00000040683


Danio rerio

Features
Gene ID: ENSDARG00000040683
  
Biological name :si:ch73-40a17.3
  
Synonyms : si:ch73-40a17.3
  
Possible biological names infered from orthology : MEP1B / meprin A subunit beta / Q16820 / Q61847
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 283764
Gene end: 293793
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000076528
Ensembl peptide - ENSDARP00000134633
NCBI entrez gene - 327586     See in Manteia.
RefSeq - XM_009296424
RefSeq - XM_017351148
swissprot - E7FDT4
swissprot - A0A0R4ILF0
ZFIN ID - ZDB-GENE-030131-5797
Ensembl - ENSDARG00000040683
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MEP1BENSGALG00000044606Gallus gallus
 MEP1BENSG00000141434Homo sapiens
 Mep1bENSMUSG00000024313Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mep1b / meprin A, beta / Q16820* / Q61847* / meprin A subunit beta*ENSDARG0000003753348
mep1a.2 / meprin A, alpha (PABA peptide hydrolase), tandem duplicate 2ENSDARG0000000802936
mep1a.1 / meprin A, alpha (PABA peptide hydrolase), tandem duplicate 1 / MEP1A* / P28825* / Q16819* / meprin A subunit alpha*ENSDARG0000002974734
CU326366.2ENSDARG0000006859312
he1.2 / he1.1 / hatching enzyme 1, tandem duplicate 1 / ASTL* / Q6HA09* / Q6HA08* / astacin like metalloendopeptidase*ENSDARG0000002365611
he1.2 / hatching enzyme 1, tandem dupliate 2 / ASTL* / Q6HA08* / Q6HA09* / astacin like metalloendopeptidase*ENSDARG0000001912211
si:ch211-167j6.5ENSDARG0000005840911
si:ch211-167j6.4ENSDARG0000007001111
c6ast1 / six-cysteine containing astacin protease 1ENSDARG0000006921610
he1.3 / hatching enzyme 1, tandem duplicate 3 / ASTL* / Q6HA08* / Q6HA09* / astacin like metalloendopeptidase*ENSDARG0000002267010
c6ast3 / six-cysteine containing astacin protease 3ENSDARG0000002450310
npsn / nephrosinENSDARG0000001042310
c6ast4 / six-cysteine containing astacin protease 4ENSDARG0000005257810


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR000998  MAM domain
 IPR001506  Peptidase M12A
 IPR006026  Peptidase, metallopeptidase
 IPR008294  Meprin alpha/beta subunit
 IPR008974  TRAF-like
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR034302  Meprin beta subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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