ENSDARG00000040890


Danio rerio

Features
Gene ID: ENSDARG00000040890
  
Biological name :fdps
  
Synonyms : farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) / fdps
  
Possible biological names infered from orthology : farnesyl diphosphate synthase / Farnesyl pyrophosphate synthase / P14324 / Q920E5
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 13993351
Gene end: 14025096
  
Corresponding Affymetrix probe sets: Dr.17283.1.A1_at (Zebrafish Array)   Dr.4267.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000146210
Ensembl peptide - ENSDARP00000059927
Ensembl peptide - ENSDARP00000105887
Ensembl peptide - ENSDARP00000111961
swissprot - E9QE30
swissprot - F1QEG3
swissprot - F1QN60
ZFIN ID - ZDB-GENE-050506-78
Ensembl - ENSDARG00000040890
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FDPSENSGALG00000028880Gallus gallus
 FDPSENSG00000160752Homo sapiens
 FdpsENSMUSG00000059743Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000092  Polyprenyl synthetase
 IPR008949  Isoprenoid synthase domain superfamily
 IPR033749  Polyprenyl synthetase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008299 isoprenoid biosynthetic process IEA
 biological_processGO:0045337 farnesyl diphosphate biosynthetic process IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004161 dimethylallyltranstransferase activity IBA
 molecular_functionGO:0004337 geranyltranstransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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