ENSDARG00000041237


Danio rerio

Features
Gene ID: ENSDARG00000041237
  
Biological name :med18
  
Synonyms : med18 / mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) / Q7T3H7
  
Possible biological names infered from orthology : mediator complex subunit 18 / Mediator of RNA polymerase II transcription subunit 18 / Q9BUE0 / Q9CZ82
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 7376471
Gene end: 7379328
  
Corresponding Affymetrix probe sets: Dr.19506.1.A1_at (Zebrafish Array)   NM_200335_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000060446
NCBI entrez gene - 393306     See in Manteia.
RefSeq - NM_200335
RefSeq Peptide - NP_956629
swissprot - Q7T3H7
ZFIN ID - ZDB-GENE-040426-1276
Ensembl - ENSDARG00000041237
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MED18ENSGALG00000028149Gallus gallus
 MED18ENSG00000130772Homo sapiens
 Med18ENSMUSG00000066042Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019095  Mediator complex, subunit Med18


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006369 termination of RNA polymerase II transcription IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016592 mediator complex IBA
 cellular_componentGO:0070847 core mediator complex IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr