ENSDARG00000041600


Danio rerio

Features
Gene ID: ENSDARG00000041600
  
Biological name :wdr83
  
Synonyms : wdr83 / WD repeat domain containing 83
  
Possible biological names infered from orthology : Q9BRX9 / Q9DAJ4 / WD repeat domain 83
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 26264543
Gene end: 26274177
  
Corresponding Affymetrix probe sets: Dr.22632.1.A1_at (Zebrafish Array)   NM_001002429_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000060977
NCBI entrez gene - 436702     See in Manteia.
RefSeq - NM_001002429
RefSeq Peptide - NP_001002429
swissprot - A5PMP4
ZFIN ID - ZDB-GENE-040718-126
Ensembl - ENSDARG00000041600
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR83ENSG00000123154Homo sapiens
 Wdr83ENSMUSG00000005150Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atg16l1 / ATG16 autophagy related 16-like 1 (S. cerevisiae) / Q8C0J2* / Q676U5* / autophagy related 16 like 1* / autophagy related 16-like 1 (S. cerevisiae)*ENSDARG0000009943024
taf5l / TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor / Q91WQ5* / O75529* / TATA-box binding protein associated factor 5 like* / Mus musculus TATA-box bin...ENSDARG0000002580822
taf5 / TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor / Q15542* / TATA-box binding protein associated factor 5*ENSDARG0000001832521
atg16l2 / ATG16 autophagy related 16-like 2 (S. cerevisiae) / Q8NAA4* / autophagy related 16 like 2*ENSDARG0000010938411
atg16l2 / ATG16 autophagy related 16-like 2 (S. cerevisiae) / Q8NAA4* / Q6KAU8* / autophagy related 16 like 2* / autophagy related 16-like 2 (S. cerevisiae)*ENSDARG000000432381


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
MAP2K and MAPK activation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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