ENSDARG00000041779


Danio rerio

Features
Gene ID: ENSDARG00000041779
  
Biological name :trdn
  
Synonyms : trdn / triadin
  
Possible biological names infered from orthology : E9Q9K5 / Q13061
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 40150612
Gene end: 40231379
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098762
Ensembl peptide - ENSDARP00000110075
Ensembl peptide - ENSDARP00000121870
Ensembl peptide - ENSDARP00000091815
swissprot - A3KNU6
swissprot - E7F0C1
swissprot - E9QH58
swissprot - I7HPA7
ZFIN ID - ZDB-GENE-041014-193
Ensembl - ENSDARG00000041779
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRDNENSGALG00000014848Gallus gallus
 TRDNENSG00000186439Homo sapiens
 TrdnENSMUSG00000019787Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007943  Aspartyl beta-hydroxylase/Triadin domain
 IPR010798  Triadin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IBA
 biological_processGO:0010649 regulation of cell communication by electrical coupling IBA
 biological_processGO:0010880 regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum IBA
 biological_processGO:0060047 heart contraction IBA
 biological_processGO:0060316 positive regulation of ryanodine-sensitive calcium-release channel activity IBA
 biological_processGO:0086036 regulation of cardiac muscle cell membrane potential IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0014701 junctional sarcoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0044325 ion channel binding IBA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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