ENSG00000186439


Homo sapiens

Features
Gene ID: ENSG00000186439
  
Biological name :TRDN
  
Synonyms : Q13061 / TRDN / triadin
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q22.31
Gene start: 123216339
Gene end: 123637093
  
Corresponding Affymetrix probe sets: 1552791_a_at (Human Genome U133 Plus 2.0 Array)   222287_at (Human Genome U133 Plus 2.0 Array)   222919_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000486095
Ensembl peptide - ENSP00000333984
Ensembl peptide - ENSP00000354307
Ensembl peptide - ENSP00000437684
Ensembl peptide - ENSP00000439281
Ensembl peptide - ENSP00000406768
NCBI entrez gene - 10345     See in Manteia.
OMIM - 603283
RefSeq - NM_001256020
RefSeq - NM_001256022
RefSeq - NM_006073
RefSeq - NM_001256021
RefSeq Peptide - NP_001242949
RefSeq Peptide - NP_001242951
RefSeq Peptide - NP_006064
RefSeq Peptide - NP_001242950
swissprot - Q13061
swissprot - H0Y6P0
swissprot - H7BY47
swissprot - H9ME53
Ensembl - ENSG00000186439
  
Related genetic diseases (OMIM): 615441 - Ventricular tachycardia, catecholaminergic polymorphic, 5, with or without muscle weakness, 615441
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trdnENSDARG00000041779Danio rerio
 TRDNENSGALG00000014848Gallus gallus
 TrdnENSMUSG00000019787Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007943  Aspartyl beta-hydroxylase/Triadin domain
 IPR010798  Triadin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006874 cellular calcium ion homeostasis ISS
 biological_processGO:0006936 muscle contraction TAS
 biological_processGO:0010649 regulation of cell communication by electrical coupling TAS
 biological_processGO:0010880 regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum IBA
 biological_processGO:0014808 release of sequestered calcium ion into cytosol by sarcoplasmic reticulum ISS
 biological_processGO:0031122 cytoplasmic microtubule organization ISS
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0051279 regulation of release of sequestered calcium ion into cytosol TAS
 biological_processGO:0060047 heart contraction IMP
 biological_processGO:0060315 negative regulation of ryanodine-sensitive calcium-release channel activity TAS
 biological_processGO:0060316 positive regulation of ryanodine-sensitive calcium-release channel activity TAS
 biological_processGO:0086036 regulation of cardiac muscle cell membrane potential IBA
 biological_processGO:0090158 endoplasmic reticulum membrane organization ISS
 biological_processGO:1901846 positive regulation of cell communication by electrical coupling involved in cardiac conduction ISS
 biological_processGO:1903779 regulation of cardiac conduction TAS
 cellular_componentGO:0005783 endoplasmic reticulum ISS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0005891 voltage-gated calcium channel complex ISS
 cellular_componentGO:0014701 junctional sarcoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IEA
 cellular_componentGO:0030314 junctional membrane complex ISS
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane TAS
 cellular_componentGO:0033018 sarcoplasmic reticulum lumen TAS
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030674 protein binding, bridging ISS
 molecular_functionGO:0044325 ion channel binding IBA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001279 Syncope "Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. This term refers to an abnormally increased disposition to syncope." [HPO:curators]
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 HP:0001645 Sudden cardiac death 
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 HP:0001699 Sudden death 
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 HP:0002321 Vertigo "An abnormal sensation of spinning while the body is actually stationary." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0004756 Ventricular tachycardia 
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 HP:0005110 Atrial fibrillation 
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 HP:0025478 Atrial standstill "Atrial standstill or silent atrium is a rare condition presenting with the absence of electrical and mechanical activity in the atria. It presents with the absence of P waves, bradycardia, and wide QRS complex in the electrocardiogram." [PMID:23074623]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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