ENSDARG00000042004


Danio rerio

Features
Gene ID: ENSDARG00000042004
  
Biological name :nfya
  
Synonyms : nfya / nuclear transcription factor Y, alpha
  
Possible biological names infered from orthology : Mus musculus nuclear transcription factor-Y alpha (Nfya), transcript variant 3, mRNA. / nuclear transcription factor Y subunit alpha / P23511 / P23708
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 36254284
Gene end: 36279664
  
Corresponding Affymetrix probe sets: Dr.20400.1.A1_at (Zebrafish Array)   Dr.4762.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000093838
Ensembl peptide - ENSDARP00000120414
Ensembl peptide - ENSDARP00000106116
Ensembl peptide - ENSDARP00000104921
NCBI entrez gene - 83915     See in Manteia.
swissprot - E9QGB7
swissprot - E7FDD5
swissprot - A3KNH7
swissprot - F1QBT1
ZFIN ID - ZDB-GENE-010501-1
Ensembl - ENSDARG00000042004
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFYAENSGALG00000003247Gallus gallus
 NFYAENSG00000001167Homo sapiens
 NfyaENSMUSG00000023994Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfyal / nuclear transcription factor Y, alpha, like / NFYA* / P23511* / P23708* / nuclear transcription factor Y subunit alpha* / Mus musculus nuclear transcription factor-Y alpha (Nfya), t...ENSDARG0000000162181


Protein motifs (from Interpro)
Interpro ID Name
 IPR001289  Nuclear transcription factor Y subunit A
 IPR018362  CCAAT-binding factor, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0016602 CCAAT-binding factor complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr