ENSGALG00000003247


Gallus gallus

Features
Gene ID: ENSGALG00000003247
  
Biological name :NFYA
  
Synonyms : NFYA / nuclear transcription factor Y subunit alpha
  
Possible biological names infered from orthology : Mus musculus nuclear transcription factor-Y alpha (Nfya), transcript variant 3, mRNA. / P23511 / P23708
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 4723204
Gene end: 4737458
  
Corresponding Affymetrix probe sets: Gga.15767.1.S1_at (Chicken Array)   Gga.1949.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005125
NCBI entrez gene - 419917     See in Manteia.
RefSeq - XM_015298947
RefSeq - NM_001006325
RefSeq - XM_015298945
RefSeq - XM_015298946
RefSeq - XM_015298937
RefSeq - XM_015298938
RefSeq - XM_015298939
RefSeq - XM_015298940
RefSeq - XM_015298941
RefSeq - XM_015298942
RefSeq - XM_015298943
RefSeq - XM_015298944
RefSeq Peptide - NP_001006325
swissprot - Q5ZMH7
Ensembl - ENSGALG00000003247
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nfyaENSDARG00000042004Danio rerio
 nfyalENSDARG00000001621Danio rerio
 NFYAENSG00000001167Homo sapiens
 NfyaENSMUSG00000023994Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001289  Nuclear transcription factor Y subunit A
 IPR018362  CCAAT-binding factor, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016602 CCAAT-binding factor complex ISS
 cellular_componentGO:0032993 protein-DNA complex IEA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex IEA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding ISS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000041193 NFYB / P25207 / Nuclear transcription factor Y subunit beta / P25208* / P63139*  / complex






 

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contact: otassy@igbmc.fr