ENSDARG00000042005


Danio rerio

Features
Gene ID: ENSDARG00000042005
  
Biological name :elp3
  
Synonyms : elongator acetyltransferase complex subunit 3 / elp3 / Q5RIC0
  
Possible biological names infered from orthology : Elongator complex protein 3 / Q9CZX0 / Q9H9T3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 34671386
Gene end: 34700654
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113240
Ensembl peptide - ENSDARP00000127220
NCBI entrez gene - 541509     See in Manteia.
RefSeq - NM_001014322
RefSeq Peptide - NP_001014344
swissprot - Q5RIC0
ZFIN ID - ZDB-GENE-050327-35
Ensembl - ENSDARG00000042005
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELP3ENSGALG00000016624Gallus gallus
 ELP3ENSG00000134014Homo sapiens
 Elp3ENSMUSG00000022031Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000182  GNAT domain
 IPR006638  Elp3/MiaB/NifB
 IPR007197  Radical SAM
 IPR013785  Aldolase-type TIM barrel
 IPR016181  Acyl-CoA N-acyltransferase
 IPR032432  Radical SAM, C-terminal extension


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II ISS
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007409 axonogenesis IMP
 biological_processGO:0016573 histone acetylation IEA
 biological_processGO:0045859 regulation of protein kinase activity IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0008023 transcription elongation factor complex ISS
 cellular_componentGO:0033588 Elongator holoenzyme complex IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004402 histone acetyltransferase activity IBA
 molecular_functionGO:0008080 N-acetyltransferase activity IEA
 molecular_functionGO:0008607 phosphorylase kinase regulator activity ISS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009052 motor neuron motor neuron axon branched , abnormal
motor neuron axon decreased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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