ENSDARG00000042621


Danio rerio

Features
Gene ID: ENSDARG00000042621
  
Biological name :cryaba
  
Synonyms : cryaba / crystallin, alpha B, a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 18119618
Gene end: 18124678
  
Corresponding Affymetrix probe sets: Dr.8069.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000062522
NCBI entrez gene - 30393     See in Manteia.
swissprot - Q9PUR2
ZFIN ID - ZDB-GENE-991119-2
Ensembl - ENSDARG00000042621
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cryabb / crystallin, alpha B, b / CRYAB* / P23927* / P02511* / crystallin alpha B* / Alpha-crystallin B chain *ENSDARG0000010138051
cryaa / crystallin, alpha A / P02489* / CRYAA2* / P24622* / crystallin alpha A2* / Alpha-crystallin A chain *ENSDARG0000005350250
hspb1 / heat shock protein, alpha-crystallin-related, 1 / P14602* / P04792* / Heat shock protein beta-1 * / heat shock protein family B (small) member 1*ENSDARG0000004106536
si:dkey-1k23.3ENSDARG0000010542235
hspb2 / heat shock protein, alpha-crystallin-related, b2 / Q16082* / Q99PR8* / HSPB2-C11orf52* / Heat shock protein beta-2 * / HSPB2-C11orf52 readthrough (NMD candidate)* / heat shock prote...ENSDARG0000005245029
hspb6 / heat shock protein, alpha-crystallin-related, b6 / O14558* / heat shock protein family B (small) member 6*ENSDARG0000007723629
hspb8 / heat shock protein b8 / Q9UJY1* / Q9JK92* / Heat shock protein beta-8 * / heat shock protein family B (small) member 8*ENSDARG0000005836528
hspb15 / heat shock protein, alpha-crystallin-related, b15ENSDARG0000007841126
hspb3 / heat shock protein, alpha-crystallin-related, b3 / Q9QZ57* / Q12988* / Heat shock protein beta-3 * / heat shock protein family B (small) member 3*ENSDARG0000006771422


Protein motifs (from Interpro)
Interpro ID Name
 IPR001436  Alpha crystallin/Heat shock protein
 IPR002068  Alpha crystallin/Hsp20 domain
 IPR003090  Alpha-crystallin, N-terminal
 IPR008978  HSP20-like chaperone
 IPR031107  Small heat shock protein HSP20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007519 skeletal muscle tissue development IMP
 biological_processGO:0007626 locomotory behavior IMP
 biological_processGO:0030239 myofibril assembly IMP
 biological_processGO:0060047 heart contraction IMP
 cellular_componentGO:0005886 plasma membrane IDA
 molecular_functionGO:0005212 structural constituent of eye lens IEA
 molecular_functionGO:0051082 unfolded protein binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle decreased functionality , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000107 eye eye lens transparent , ameliorated
eye lens decreased size , abnormal
eye lens opaque , abnormal
Show

 ZFA:0000471 atrium atrium decreased functionality , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased mobility , abnormal
Show

 ZFA:0001115 trunk trunk curved , abnormal
Show

 ZFA:0005277 skeletal muscle skeletal muscle refractivity , abnormal
skeletal muscle nucleus circular , abnormal
skeletal muscle sarcomere disorganized , abnormal
Show

 ZFA:0009114 muscle cell muscle cell vacuole increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr