ENSDARG00000042652


Danio rerio

Features
Gene ID: ENSDARG00000042652
  
Biological name :rreb1b
  
Synonyms : ras responsive element binding protein 1b / rreb1b
  
Possible biological names infered from orthology : Q3UH06 / Q92766 / ras responsive element binding protein 1 / RREB1
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 21000334
Gene end: 21062305
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062562
Ensembl peptide - ENSDARP00000129088
Ensembl peptide - ENSDARP00000129863
NCBI entrez gene - 555701     See in Manteia.
RefSeq - XM_005163366
RefSeq - XM_678293
swissprot - X1WFT3
swissprot - A0A0A0MPI4
swissprot - X1WHZ8
ZFIN ID - ZDB-GENE-070912-273
Ensembl - ENSDARG00000042652
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RREB1ENSGALG00000012799Gallus gallus
 RREB1ENSG00000124782Homo sapiens
 Rreb1ENSMUSG00000039087Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rreb1a / ras responsive element binding protein 1a / RREB1* / Q3UH06* / Q92766* / ras responsive element binding protein 1*ENSDARG0000006370143
zbtb48 / zinc finger and BTB domain containing 48 / P10074* / Q1H9T6*ENSDARG000000392637
znf1148 / zinc finger protein 1148ENSDARG000001036895
BX510934.1ENSDARG000000875445


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0007275 multicellular organism development IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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