ENSMUSG00000039087


Mus musculus

Features
Gene ID: ENSMUSG00000039087
  
Biological name :Rreb1
  
Synonyms : Q3UH06 / Ras-responsive element-binding protein 1 / Rreb1
  
Possible biological names infered from orthology : Q92766
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A3.3
Gene start: 37778400
Gene end: 37952005
  
Corresponding Affymetrix probe sets: 10404612 (MoGene1.0st)   1428657_at (Mouse Genome 430 2.0 Array)   1434741_at (Mouse Genome 430 2.0 Array)   1438216_at (Mouse Genome 430 2.0 Array)   1442047_at (Mouse Genome 430 2.0 Array)   1452862_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000124745
Ensembl peptide - ENSMUSP00000121211
Ensembl peptide - ENSMUSP00000124802
Ensembl peptide - ENSMUSP00000049265
Ensembl peptide - ENSMUSP00000105866
Ensembl peptide - ENSMUSP00000105867
Ensembl peptide - ENSMUSP00000115599
Ensembl peptide - ENSMUSP00000116557
Ensembl peptide - ENSMUSP00000117048
Ensembl peptide - ENSMUSP00000118420
NCBI entrez gene - 68750     See in Manteia.
MGI - MGI:2443664
RefSeq - XM_011244341
RefSeq - XM_006516750
RefSeq - XM_006516751
RefSeq - XM_006516752
RefSeq - XM_006516753
RefSeq - XM_006516754
RefSeq - XM_006516756
RefSeq - XM_006516757
RefSeq - XM_006516758
RefSeq - XM_006516759
RefSeq - NM_001039188
RefSeq - NM_001177868
RefSeq - NM_001177869
RefSeq - NM_026830
RefSeq - XM_006516749
RefSeq Peptide - NP_081106
RefSeq Peptide - NP_001034277
RefSeq Peptide - NP_001171339
RefSeq Peptide - NP_001171340
swissprot - B8JJE4
swissprot - Q3UHQ4
swissprot - B8JJE5
swissprot - Q3UH06
swissprot - F6UB40
Ensembl - ENSMUSG00000039087
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rreb1aENSDARG00000063701Danio rerio
 rreb1bENSDARG00000042652Danio rerio
 RREB1ENSGALG00000012799Gallus gallus
 RREB1ENSG00000124782Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q1H9T6 / Zbtb48 / zinc finger and BTB domain containing 48 / P10074*ENSMUSG000000289527


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0010634 positive regulation of epithelial cell migration ISO
 biological_processGO:0033601 positive regulation of mammary gland epithelial cell proliferation ISO
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 biological_processGO:1900026 positive regulation of substrate adhesion-dependent cell spreading ISO
 biological_processGO:1903691 positive regulation of wound healing, spreading of epidermal cells ISO
 biological_processGO:2000394 positive regulation of lamellipodium morphogenesis ISO
 cellular_componentGO:0001650 fibrillar center ISO
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding ISO
 molecular_functionGO:0000979 RNA polymerase II core promoter sequence-specific DNA binding ISO
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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