ENSDARG00000063701


Danio rerio

Features
Gene ID: ENSDARG00000063701
  
Biological name :rreb1a
  
Synonyms : ras responsive element binding protein 1a / rreb1a
  
Possible biological names infered from orthology : Q3UH06 / Q92766 / ras responsive element binding protein 1 / RREB1
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 2346514
Gene end: 2450597
  
Corresponding Affymetrix probe sets: Dr.7489.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000147091
Ensembl peptide - ENSDARP00000118235
Ensembl peptide - ENSDARP00000149952
Ensembl peptide - ENSDARP00000087763
NCBI entrez gene - 338237     See in Manteia.
RefSeq - XM_005162477
RefSeq - XM_002666582
swissprot - F1QLA5
swissprot - F1R609
ZFIN ID - ZDB-GENE-030219-137
Ensembl - ENSDARG00000063701
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RREB1ENSGALG00000012799Gallus gallus
 RREB1ENSG00000124782Homo sapiens
 Rreb1ENSMUSG00000039087Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rreb1b / ras responsive element binding protein 1b / RREB1* / Q3UH06* / Q92766* / ras responsive element binding protein 1*ENSDARG0000004265242
zbtb48 / zinc finger and BTB domain containing 48 / P10074* / Q1H9T6*ENSDARG000000392637
BX510934.1ENSDARG000000875445
znf1148 / zinc finger protein 1148ENSDARG000001036894


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006366 transcription by RNA polymerase II IBA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0007275 multicellular organism development IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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