ENSDARG00000043247


Danio rerio

Features
Gene ID: ENSDARG00000043247
  
Biological name :gtf3c3
  
Synonyms : general transcription factor IIIC, polypeptide 3 / gtf3c3
  
Possible biological names infered from orthology : general transcription factor IIIC subunit 3 / Q9Y5Q9
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 6243906
Gene end: 6272146
  
Corresponding Affymetrix probe sets: Dr.21469.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112332
NCBI entrez gene - 553318     See in Manteia.
RefSeq - NM_001256242
RefSeq Peptide - NP_001243171
swissprot - F1RDA7
ZFIN ID - ZDB-GENE-040914-80
Ensembl - ENSDARG00000043247
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTF3C3ENSGALG00000007958Gallus gallus
 GTF3C3ENSG00000119041Homo sapiens
 Gtf3c3ENSMUSG00000041303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0006383 transcription by RNA polymerase III IBA
 cellular_componentGO:0000127 transcription factor TFIIIC complex IBA
 molecular_functionGO:0000995 RNA polymerase III general transcription initiation factor activity IBA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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