ENSGALG00000007958


Gallus gallus

Features
Gene ID: ENSGALG00000007958
  
Biological name :GTF3C3
  
Synonyms : general transcription factor 3C polypeptide 3 / GTF3C3
  
Possible biological names infered from orthology : general transcription factor IIIC, polypeptide 3 / general transcription factor IIIC subunit 3 / Q9Y5Q9
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 10009681
Gene end: 10029718
  
Corresponding Affymetrix probe sets: Gga.4375.1.S1_at (Chicken Array)   GgaAffx.11742.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044557
Ensembl peptide - ENSGALP00000012911
NCBI entrez gene - 424052     See in Manteia.
RefSeq - XM_015289399
RefSeq - XM_015289396
RefSeq - XM_015289397
RefSeq - XM_015289398
RefSeq - NM_001006515
RefSeq Peptide - NP_001006515
swissprot - F1NSH9
swissprot - A0A1D5NW24
Ensembl - ENSGALG00000007958
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf3c3ENSDARG00000043247Danio rerio
 GTF3C3ENSG00000119041Homo sapiens
 Gtf3c3ENSMUSG00000041303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0006383 transcription by RNA polymerase III IBA
 cellular_componentGO:0000127 transcription factor TFIIIC complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0000995 RNA polymerase III general transcription initiation factor activity IBA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr