ENSG00000119041


Homo sapiens

Features
Gene ID: ENSG00000119041
  
Biological name :GTF3C3
  
Synonyms : general transcription factor IIIC subunit 3 / GTF3C3 / Q9Y5Q9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q33.1
Gene start: 196763032
Gene end: 196799725
  
Corresponding Affymetrix probe sets: 1555439_at (Human Genome U133 Plus 2.0 Array)   1569058_at (Human Genome U133 Plus 2.0 Array)   218343_s_at (Human Genome U133 Plus 2.0 Array)   222604_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000438797
Ensembl peptide - ENSP00000398385
Ensembl peptide - ENSP00000406685
Ensembl peptide - ENSP00000263956
Ensembl peptide - ENSP00000386465
Ensembl peptide - ENSP00000389992
Ensembl peptide - ENSP00000391724
Ensembl peptide - ENSP00000394065
NCBI entrez gene - 9330     See in Manteia.
OMIM - 604888
RefSeq - XM_005246965
RefSeq - NM_001206774
RefSeq - NM_012086
RefSeq Peptide - NP_001193703
RefSeq Peptide - NP_036218
swissprot - Q9Y5Q9
swissprot - F8WC64
swissprot - H0YFI7
swissprot - H7C0C0
swissprot - H7BZV8
swissprot - H7C143
Ensembl - ENSG00000119041
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf3c3ENSDARG00000043247Danio rerio
 GTF3C3ENSGALG00000007958Gallus gallus
 Gtf3c3ENSMUSG00000041303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IC
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0006383 transcription by RNA polymerase III IBA
 biological_processGO:0042791 5S class rRNA transcription by RNA polymerase III IC
 biological_processGO:0042797 tRNA transcription by RNA polymerase III IC
 cellular_componentGO:0000127 transcription factor TFIIIC complex IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IDA
 molecular_functionGO:0000995 RNA polymerase III general transcription initiation factor activity IBA
 molecular_functionGO:0003677 DNA binding IC
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
RNA Polymerase III Abortive And Retractive Initiation
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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