ENSDARG00000043396


Danio rerio

Features
Gene ID: ENSDARG00000043396
  
Biological name :fndc4a
  
Synonyms : fibronectin type III domain containing 4a / fndc4a
  
Possible biological names infered from orthology : fibronectin type III domain containing 4 / FNDC4 / Mus musculus fibronectin type III domain containing 4 (Fndc4), transcript variant 1, mRNA. / Q3TR08 / Q9H6D8
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 19212962
Gene end: 19271872
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000063705
Ensembl peptide - ENSDARP00000117386
NCBI entrez gene - 567985     See in Manteia.
swissprot - F1Q5A0
swissprot - Q5RGM1
ZFIN ID - ZDB-GENE-041014-146
Ensembl - ENSDARG00000043396
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FNDC4ENSGALG00000016507Gallus gallus
 FNDC4ENSG00000115226Homo sapiens
 Fndc4ENSMUSG00000038552Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fndc4b / fibronectin type III domain containing 4b / FNDC4* / Q9H6D8* / fibronectin type III domain containing 4*ENSDARG0000000994965
Q1L867 / fndc5b / fibronectin type III domain containing 5b / FNDC5* / Q8K4Z2* / Q8NAU1* / fibronectin type III domain containing 5* / Fibronectin type III domain-containing protein 5 Irisin*ENSDARG0000003589549
fndc5a / fibronectin type III domain containing 5a / FNDC5* / Q8K4Z2* / Q8NAU1* / fibronectin type III domain containing 5* / Fibronectin type III domain-containing protein 5 Irisin*ENSDARG0000006973948


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr