ENSGALG00000016507


Gallus gallus

Features
Gene ID: ENSGALG00000016507
  
Biological name :FNDC4
  
Synonyms : FNDC4 / Gallus gallus fibronectin type III domain containing 4 (FNDC4), mRNA.
  
Possible biological names infered from orthology : fibronectin type III domain containing 4 / Mus musculus fibronectin type III domain containing 4 (Fndc4), transcript variant 1, mRNA. / Q3TR08 / Q9H6D8
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 104806419
Gene end: 104811114
  
Corresponding Affymetrix probe sets: Gga.18074.1.S1_at (Chicken Array)   Gga.19492.1.S1_at (Chicken Array)   GgaAffx.21459.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026581
NCBI entrez gene - 421981     See in Manteia.
RefSeq - NM_001318412
RefSeq - XM_015285034
RefSeq - XM_419991
RefSeq Peptide - NP_001305341
swissprot - F1NUC6
Ensembl - ENSGALG00000016507
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fndc4aENSDARG00000043396Danio rerio
 fndc4bENSDARG00000009949Danio rerio
 FNDC4ENSG00000115226Homo sapiens
 Fndc4ENSMUSG00000038552Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FNDC5 / Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. / Q8K4Z2* / Q8NAU1* / fibronectin type III domain containing 5* / Fibronectin type III domain-containing protei...ENSGALG0000000356754


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050728 negative regulation of inflammatory response IEA
 biological_processGO:0071559 response to transforming growth factor beta IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr