ENSDARG00000043854


Danio rerio

Features
Gene ID: ENSDARG00000043854
  
Biological name :ppil4
  
Synonyms : peptidylprolyl isomerase (cyclophilin)-like 4 / ppil4
  
Possible biological names infered from orthology : Peptidyl-prolyl cis-trans isomerase-like 4 / peptidylprolyl isomerase like 4 / Q8WUA2 / Q9CXG3
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 2982381
Gene end: 3004126
  
Corresponding Affymetrix probe sets: Dr.6397.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000064389
NCBI entrez gene - 554886     See in Manteia.
RefSeq - NM_001128330
RefSeq Peptide - NP_001121802
swissprot - A5PM92
ZFIN ID - ZDB-GENE-030131-6251
Ensembl - ENSDARG00000043854
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPIL4ENSGALG00000012364Gallus gallus
 PPIL4ENSG00000131013Homo sapiens
 Ppil4ENSMUSG00000015757Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cwc27 / CWC27 spliceosome-associated protein homolog (S. cerevisiae) / Q3TKY6* / Q6UX04* / CWC27 spliceosome associated protein homolog* / Peptidyl-prolyl cis-trans isomerase CWC27 homolog *ENSDARG0000004372720
ppil2 / peptidylprolyl isomerase (cyclophilin)-like 2 / Q13356* / Q9D787* / peptidylprolyl isomerase like 2* / Mus musculus peptidylprolyl isomerase (cyclophilin)-like 2 (Ppil2), transcript...ENSDARG0000000201618
ppib / peptidylprolyl isomerase B (cyclophilin B) / P23284* / P24369* / peptidylprolyl isomerase B*ENSDARG0000009279815
ppil1 / peptidylprolyl isomerase (cyclophilin)-like 1 / Q9D0W5* / Q9Y3C6* / peptidylprolyl isomerase like 1* / Peptidyl-prolyl cis-trans isomerase-like 1 *ENSDARG0000001542214
ppwd1 / peptidylprolyl isomerase domain and WD repeat containing 1 / Q8CEC6* / Q96BP3* / Peptidylprolyl isomerase domain and WD repeat-containing protein 1 *ENSDARG0000006316114
ppil3 / peptidylprolyl isomerase (cyclophilin)-like 3 / Q9D6L8* / Q9H2H8* / peptidylprolyl isomerase like 3* / Peptidyl-prolyl cis-trans isomerase-like 3 *ENSDARG0000003337014
ppih / peptidylprolyl isomerase H (cyclophilin H) / Q9D868* / Gm7879* / O43447* / peptidylprolyl isomerase H* / Peptidyl-prolyl cis-trans isomerase H *ENSDARG0000004153011
ppil6 / peptidylprolyl isomerase (cyclophilin)-like 6 / Q8IXY8* / peptidylprolyl isomerase like 6*ENSDARG0000004215711


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002130  Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
 IPR024936  Cyclophilin-type peptidyl-prolyl cis-trans isomerase
 IPR029000  Cyclophilin-like domain superfamily
 IPR035538  PPIL4-like, cyclophilin domain
 IPR035542  Cyclophilin-RNA interacting protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000413 protein peptidyl-prolyl isomerization IEA
 biological_processGO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003755 peptidyl-prolyl cis-trans isomerase activity IBA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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