ENSDARG00000041530


Danio rerio

Features
Gene ID: ENSDARG00000041530
  
Biological name :ppih
  
Synonyms : peptidylprolyl isomerase H (cyclophilin H) / ppih
  
Possible biological names infered from orthology : Gm7879 / O43447 / Peptidyl-prolyl cis-trans isomerase H / peptidylprolyl isomerase H / Q9D868
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 47152704
Gene end: 47206399
  
Corresponding Affymetrix probe sets: Dr.18161.1.S1_at (Zebrafish Array)   NM_201205_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000119457
Ensembl peptide - ENSDARP00000060876
Ensembl peptide - ENSDARP00000060879
Ensembl peptide - ENSDARP00000060882
NCBI entrez gene - 494165     See in Manteia.
RefSeq - NM_001009902
RefSeq - NM_201205
RefSeq Peptide - NP_957499
RefSeq Peptide - NP_001009902
swissprot - F1R6Z6
swissprot - B0V156
swissprot - Q6TLD7
swissprot - Q7ZVQ9
ZFIN ID - ZDB-GENE-040625-127
Ensembl - ENSDARG00000041530
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPIHENSGALG00000004874Gallus gallus
 PPIHENSG00000171960Homo sapiens
 Gm7879ENSMUSG00000033036Mus musculus
 PpihENSMUSG00000060288Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppib / peptidylprolyl isomerase B (cyclophilin B) / P23284* / P24369* / peptidylprolyl isomerase B*ENSDARG0000009279851
ppil2 / peptidylprolyl isomerase (cyclophilin)-like 2 / Q13356* / Q9D787* / peptidylprolyl isomerase like 2* / Mus musculus peptidylprolyl isomerase (cyclophilin)-like 2 (Ppil2), transcript...ENSDARG0000000201640
ppil6 / peptidylprolyl isomerase (cyclophilin)-like 6 / Q8IXY8* / peptidylprolyl isomerase like 6*ENSDARG0000004215738
ppwd1 / peptidylprolyl isomerase domain and WD repeat containing 1 / Q8CEC6* / Q96BP3* / Peptidylprolyl isomerase domain and WD repeat-containing protein 1 *ENSDARG0000006316138
cwc27 / CWC27 spliceosome-associated protein homolog (S. cerevisiae) / Q3TKY6* / Q6UX04* / CWC27 spliceosome associated protein homolog* / Peptidyl-prolyl cis-trans isomerase CWC27 homolog *ENSDARG0000004372735
ppil3 / peptidylprolyl isomerase (cyclophilin)-like 3 / Q9D6L8* / Q9H2H8* / peptidylprolyl isomerase like 3* / Peptidyl-prolyl cis-trans isomerase-like 3 *ENSDARG0000003337034
ppil1 / peptidylprolyl isomerase (cyclophilin)-like 1 / Q9D0W5* / Q9Y3C6* / peptidylprolyl isomerase like 1* / Peptidyl-prolyl cis-trans isomerase-like 1 *ENSDARG0000001542234
ppil4 / peptidylprolyl isomerase (cyclophilin)-like 4 / Q8WUA2* / Q9CXG3* / peptidylprolyl isomerase like 4* / Peptidyl-prolyl cis-trans isomerase-like 4 *ENSDARG0000004385429


Protein motifs (from Interpro)
Interpro ID Name
 IPR002130  Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
 IPR020892  Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
 IPR024936  Cyclophilin-type peptidyl-prolyl cis-trans isomerase
 IPR029000  Cyclophilin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000413 protein peptidyl-prolyl isomerization IEA
 biological_processGO:0001525 angiogenesis IMP
 biological_processGO:0006457 protein folding IEA
 molecular_functionGO:0003755 peptidyl-prolyl cis-trans isomerase activity IBA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk edematous , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel decreased functionality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000067639 prpf4 / PRP4 pre-mRNA processing factor 4 homolog (yeast) / O43172* / Q9DAW6* / pre-mRNA processing factor 4*  / complex






 

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