ENSDARG00000043727


Danio rerio

Features
Gene ID: ENSDARG00000043727
  
Biological name :cwc27
  
Synonyms : cwc27 / CWC27 spliceosome-associated protein homolog (S. cerevisiae)
  
Possible biological names infered from orthology : CWC27 spliceosome associated protein homolog / Peptidyl-prolyl cis-trans isomerase CWC27 homolog / Q3TKY6 / Q6UX04
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 11398111
Gene end: 11501424
  
Corresponding Affymetrix probe sets: Dr.17977.1.S1_at (Zebrafish Array)   NM_201103_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000064209
NCBI entrez gene - 394078     See in Manteia.
RefSeq - NM_201103
RefSeq - XM_009305161
RefSeq Peptide - NP_957397
swissprot - F1QRY1
ZFIN ID - ZDB-GENE-040426-1118
Ensembl - ENSDARG00000043727
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CWC27ENSGALG00000014747Gallus gallus
 CWC27ENSG00000153015Homo sapiens
 Cwc27ENSMUSG00000021715Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppil2 / peptidylprolyl isomerase (cyclophilin)-like 2 / Q13356* / Q9D787* / peptidylprolyl isomerase like 2* / Mus musculus peptidylprolyl isomerase (cyclophilin)-like 2 (Ppil2), transcript...ENSDARG0000000201620
ppil4 / peptidylprolyl isomerase (cyclophilin)-like 4 / Q8WUA2* / Q9CXG3* / peptidylprolyl isomerase like 4* / Peptidyl-prolyl cis-trans isomerase-like 4 *ENSDARG0000004385419
ppil3 / peptidylprolyl isomerase (cyclophilin)-like 3 / Q9D6L8* / Q9H2H8* / peptidylprolyl isomerase like 3* / Peptidyl-prolyl cis-trans isomerase-like 3 *ENSDARG0000003337016
ppil1 / peptidylprolyl isomerase (cyclophilin)-like 1 / Q9D0W5* / Q9Y3C6* / peptidylprolyl isomerase like 1* / Peptidyl-prolyl cis-trans isomerase-like 1 *ENSDARG0000001542215
ppwd1 / peptidylprolyl isomerase domain and WD repeat containing 1 / Q8CEC6* / Q96BP3* / Peptidylprolyl isomerase domain and WD repeat-containing protein 1 *ENSDARG0000006316115
ppib / peptidylprolyl isomerase B (cyclophilin B) / P23284* / P24369* / peptidylprolyl isomerase B*ENSDARG0000009279814
ppil6 / peptidylprolyl isomerase (cyclophilin)-like 6 / Q8IXY8* / peptidylprolyl isomerase like 6*ENSDARG0000004215714
ppih / peptidylprolyl isomerase H (cyclophilin H) / Q9D868* / Gm7879* / O43447* / peptidylprolyl isomerase H* / Peptidyl-prolyl cis-trans isomerase H *ENSDARG0000004153013


Protein motifs (from Interpro)
Interpro ID Name
 IPR002130  Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
 IPR020892  Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
 IPR024936  Cyclophilin-type peptidyl-prolyl cis-trans isomerase
 IPR029000  Cyclophilin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000413 protein peptidyl-prolyl isomerization IEA
 biological_processGO:0006457 protein folding IEA
 molecular_functionGO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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